RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 FANCD2Q9BXW9 1451 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 TMCO5BA8MYB1 307 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 GFRA3O60609 400 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 PPFIA2O75334 1257 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 ZRANB2O95218 330 aaKnown RBP eCLIP7.71□□□□□ -1.18
KARS-211ENST00000569298 IVLP07476 585 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 RWDD2BP57060 319 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 BMS1Q14692 1282 aaKnown RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 RAB3GAP1Q15042 981 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 HDGFL1Q5TGJ6 251 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 ARMCX6Q7L4S7 300 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 ZNF397Q8NF99 534 aaPredicted RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 UTP14AQ9BVJ6 771 aaKnown RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 ETAA1Q9NY74 926 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 LRPPRCP42704 1394 aaKnown RBP7.71□□□□□ -1.18
KARS-211ENST00000569298 CCNB3Q8WWL7 1395 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 RAB3GAP2Q9H2M9 1393 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 PLEKHG2Q9H7P9 1386 aa7.71□□□□□ -1.18
KARS-211ENST00000569298 MIA2Q96PC5 1412 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 CFTRP13569 1480 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 TOP2AP11388 1531 aaKnown RBP7.7□□□□□ -1.18
KARS-211ENST00000569298 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
KARS-211ENST00000569298 TPM1P09493 284 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 PAX7P23759 505 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 PEX19P40855 299 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 SLC19A1P41440 591 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 TPM4P67936 248 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 MCM6Q14566 821 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 RGL3Q3MIN7 710 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 BRICD5Q6PL45 260 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 SRLQ86TD4 932 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
KARS-211ENST00000569298 FBXO18Q8NFZ0 1043 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 GOLGA5Q8TBA6 731 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 SH3GL3Q99963 347 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 FAM107BQ9H098 131 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 RANBP17Q9H2T7 1088 aaKnown RBP7.7□□□□□ -1.18
KARS-211ENST00000569298 TBC1D2BQ9UPU7 963 aa7.7□□□□□ -1.18
KARS-211ENST00000569298 EIF3AQ14152 1382 aaKnown RBP7.7□□□□□ -1.18
KARS-211ENST00000569298 WDR62O43379 1518 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 NRG2O14511 850 aaPredicted RBP7.69□□□□□ -1.18
KARS-211ENST00000569298 KDM4AO75164 1064 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 RPS6KA5O75582 802 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 BAG4O95429 457 aaKnown RBP7.69□□□□□ -1.18
KARS-211ENST00000569298 SCP2P22307 547 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 ABCD1P33897 745 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 DNAJC21Q5F1R6 531 aaKnown RBP7.69□□□□□ -1.18
KARS-211ENST00000569298 TTLL5Q6EMB2 1281 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 EFCAB13Q8IY85 973 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 FAM160A2Q8N612 972 aaPredicted RBP7.69□□□□□ -1.18
KARS-211ENST00000569298 SYNPO2Q9UMS6 1093 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 IL16Q14005 1332 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 PRDM2Q13029 1718 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 NCOA1Q15788 1441 aa7.69□□□□□ -1.18
KARS-211ENST00000569298 SMTNL1A8MU46 457 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 HTATSF1O43719 755 aaKnown RBP7.68□□□□□ -1.18
KARS-211ENST00000569298 USP46P62068 366 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 NCBP1Q09161 790 aaKnown RBP7.68□□□□□ -1.18
KARS-211ENST00000569298 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 AP1ARQ63HQ0 302 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 WWC2Q6AWC2 1192 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 Q6ZNB5 142 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
KARS-211ENST00000569298 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 AGAP3Q96P47 875 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 MMTAG2Q9BU76 263 aaKnown RBP7.68□□□□□ -1.18
KARS-211ENST00000569298 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
KARS-211ENST00000569298 UBA5Q9GZZ9 404 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 ZNF446Q9NWS9 450 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 SYNRGQ9UMZ2 1314 aa7.68□□□□□ -1.18
KARS-211ENST00000569298 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 A6NJR5 290 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 KIF2AO00139 706 aaPredicted RBP7.67□□□□□ -1.18
KARS-211ENST00000569298 APBB1O00213 710 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 RAD21O60216 631 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 SMC2O95347 1197 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 PDIA5Q14554 519 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 PPP2R5AQ15172 486 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 Q3C1V9 767 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 AMOTQ4VCS5 1084 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 CCDC184Q52MB2 194 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 LIAT1Q6ZQX7 453 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 ZNF598Q86UK7 904 aaKnown RBP7.67□□□□□ -1.18
KARS-211ENST00000569298 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.67□□□□□ -1.18
KARS-211ENST00000569298 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 TCP11Q8WWU5 503 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 CCDC97Q96F63 343 aaPredicted RBP7.67□□□□□ -1.18
KARS-211ENST00000569298 DRC1Q96MC2 740 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 CHCHD3Q9NX63 227 aaKnown RBP7.67□□□□□ -1.18
KARS-211ENST00000569298 ABCF2Q9UG63 623 aa7.67□□□□□ -1.18
KARS-211ENST00000569298 IMPDH2P12268 514 aa7.66□□□□□ -1.18
KARS-211ENST00000569298 PRPHP41219 470 aa7.66□□□□□ -1.18
KARS-211ENST00000569298 INHBEP58166 350 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms