RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
SPG7-209ENST00000564047 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
SPG7-209ENST00000564047 KCNQ4P56696 695 aa16.4■□□□□ 0.22
SPG7-209ENST00000564047 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
SPG7-209ENST00000564047 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
SPG7-209ENST00000564047 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
SPG7-209ENST00000564047 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
SPG7-209ENST00000564047 POLD1P28340 1107 aa16.39■□□□□ 0.21
SPG7-209ENST00000564047 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
SPG7-209ENST00000564047 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
SPG7-209ENST00000564047 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
SPG7-209ENST00000564047 ABCC4O15439 1325 aa16.39■□□□□ 0.21
SPG7-209ENST00000564047 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
SPG7-209ENST00000564047 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
SPG7-209ENST00000564047 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
SPG7-209ENST00000564047 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
SPG7-209ENST00000564047 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 RLBP1P12271 317 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
SPG7-209ENST00000564047 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
SPG7-209ENST00000564047 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
SPG7-209ENST00000564047 FKBP8Q14318 412 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 PLBD2Q8NHP8 589 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 DNAAF4Q8WXU2 420 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 ADCY9O60503 1353 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
SPG7-209ENST00000564047 A0A087WZG4 1122 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 F6X3S4 739 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
SPG7-209ENST00000564047 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
SPG7-209ENST00000564047 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 TTLL7Q6ZT98 887 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 AK7Q96M32 723 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
SPG7-209ENST00000564047 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
SPG7-209ENST00000564047 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
SPG7-209ENST00000564047 GNPATO15228 680 aa16.34■□□□□ 0.21
SPG7-209ENST00000564047 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
SPG7-209ENST00000564047 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
SPG7-209ENST00000564047 CRBNQ96SW2 442 aa16.34■□□□□ 0.21
SPG7-209ENST00000564047 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
SPG7-209ENST00000564047 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
SPG7-209ENST00000564047 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.21
SPG7-209ENST00000564047 SLC4A10Q6U841 1118 aa16.33■□□□□ 0.2
SPG7-209ENST00000564047 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
SPG7-209ENST00000564047 METTL22Q9BUU2 404 aaPredicted RBP16.33■□□□□ 0.2
SPG7-209ENST00000564047 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
SPG7-209ENST00000564047 COL15A1P39059 1388 aa16.33■□□□□ 0.2
SPG7-209ENST00000564047 ATP10DQ9P241 1426 aa16.33■□□□□ 0.2
SPG7-209ENST00000564047 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
SPG7-209ENST00000564047 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
SPG7-209ENST00000564047 ITPRIPQ8IWB1 547 aa16.32■□□□□ 0.2
SPG7-209ENST00000564047 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
SPG7-209ENST00000564047 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
SPG7-209ENST00000564047 RGL2O15211 777 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 ADRA2BP18089 450 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 LINS1Q8NG48 757 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 EXOC6Q8TAG9 804 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 SRCIN1Q9C0H9 1055 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
SPG7-209ENST00000564047 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
SPG7-209ENST00000564047 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
SPG7-209ENST00000564047 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
SPG7-209ENST00000564047 HSPA6P17066 643 aa16.3■□□□□ 0.2
SPG7-209ENST00000564047 SSFA2P28290 1259 aa16.3■□□□□ 0.2
SPG7-209ENST00000564047 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
SPG7-209ENST00000564047 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
SPG7-209ENST00000564047 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
SPG7-209ENST00000564047 AAMPQ13685 434 aa16.29■□□□□ 0.2
SPG7-209ENST00000564047 HSP90AB3PQ58FF7 597 aa16.29■□□□□ 0.2
SPG7-209ENST00000564047 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
SPG7-209ENST00000564047 MYD88Q99836 296 aa16.29■□□□□ 0.2
SPG7-209ENST00000564047 GPBP1L1Q9HC44 474 aaPredicted RBP16.29■□□□□ 0.2
SPG7-209ENST00000564047 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
SPG7-209ENST00000564047 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
SPG7-209ENST00000564047 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
SPG7-209ENST00000564047 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
SPG7-209ENST00000564047 TUBGCP6Q96RT7 1819 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
SPG7-209ENST00000564047 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPG7-209ENST00000564047 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
SPG7-209ENST00000564047 HLFQ16534 295 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms