RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 NAP1L5Q96NT1 182 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 POGKQ9P215 609 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 SYNJ2O15056 1496 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 NUP153P49790 1475 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 IQGAP1P46940 1657 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 ATP9BO43861 1147 aa7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 ATG7O95352 703 aa7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 MAP7D2Q96T17 732 aa7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 UPF2Q9HAU5 1272 aaKnown RBP7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 MAST1Q9Y2H9 1570 aa7.53□□□□□ -1.2
SNRPA1-209ENST00000560307 GPATCH8Q9UKJ3 1502 aaKnown RBP7.52□□□□□ -1.2
SNRPA1-209ENST00000560307 ST20-MTHFSA0A0A6YYL1 179 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 MSTNO14793 375 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 NR1H3Q13133 447 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 Q3C1V9 767 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 PDCL3Q9H2J4 239 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 ERBINQ96RT1 1412 aa7.52□□□□□ -1.21
SNRPA1-209ENST00000560307 PLIN1O60240 522 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 MAN1A2O60476 641 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 PPFIA3O75145 1194 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 XRCC6P12956 609 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 MCM4P33991 863 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 MMP16P51512 607 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 TBC1D32Q96NH3 1257 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 POLR3GLQ9BT43 218 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 CHMP5Q9NZZ3 219 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 NCOA3Q9Y6Q9 1424 aa7.51□□□□□ -1.21
SNRPA1-209ENST00000560307 ATP10AO60312 1499 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 PLEKHH1Q9ULM0 1364 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 IQGAP3Q86VI3 1631 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 TMEM88BA6NKF7 163 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 ESPNB1AK53 854 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 SKIP12755 728 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 KRT76Q01546 638 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 SLFN5Q08AF3 891 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 Q8N3U1 123 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 ASXL1Q8IXJ9 1541 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 DISP1Q96F81 1524 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 MYOM1P52179 1685 aa7.5□□□□□ -1.21
SNRPA1-209ENST00000560307 KIAA1210Q9ULL0 1709 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 FAM135AQ9P2D6 1515 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 ZBBXA8MT70 800 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 C20orf194Q5TEA3 1177 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 MYH16Q9H6N6 1097 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 C9orf84Q5VXU9 1444 aa7.49□□□□□ -1.21
SNRPA1-209ENST00000560307 IBTKQ9P2D0 1353 aaPredicted RBP7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 E9PSI1 815 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 CTHP32929 405 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 WDR43Q15061 677 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 ARHGAP31Q2M1Z3 1444 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 SKOR2Q2VWA4 1001 aaPredicted RBP7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 LYPD8Q6UX82 237 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 MTERF4Q7Z6M4 381 aaKnown RBP7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 GRPEL1Q9HAV7 217 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 REREQ9P2R6 1566 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 A2MP01023 1474 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 WDR7Q9Y4E6 1490 aa7.48□□□□□ -1.21
SNRPA1-209ENST00000560307 DUOX2Q9NRD8 1548 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 NEURL4Q96JN8 1562 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 RTEL1-TNFRSF6BF6WH68 1400 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 SIAH2O43255 324 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 TMF1P82094 1093 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 DESI1Q6ICB0 168 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 FKBPLQ9UIM3 349 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
SNRPA1-209ENST00000560307 NUP155O75694 1391 aa7.46□□□□□ -1.21
SNRPA1-209ENST00000560307 PDS5BQ9NTI5 1447 aa7.46□□□□□ -1.21
SNRPA1-209ENST00000560307 MADDQ8WXG6 1647 aa7.46□□□□□ -1.21
SNRPA1-209ENST00000560307 RGS3P49796 1198 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 CCDC173Q0VFZ6 552 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 HS1BP3Q53T59 392 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 GALNT6Q8NCL4 622 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 STK32AQ8WU08 396 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 USB1Q9BQ65 265 aaKnown RBP7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 MAP10Q9P2G4 905 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 GRIN2AQ12879 1464 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms