RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
HERC1-206ENST00000559996 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
HERC1-206ENST00000559996 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
HERC1-206ENST00000559996 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
HERC1-206ENST00000559996 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
HERC1-206ENST00000559996 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 RLBP1P12271 317 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 TRIM27P14373 513 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 MYL6BP14649 208 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 FLIIQ13045 1269 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
HERC1-206ENST00000559996 RPS6KA4O75676 772 aa12□□□□□ -0.49
HERC1-206ENST00000559996 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
HERC1-206ENST00000559996 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
HERC1-206ENST00000559996 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
HERC1-206ENST00000559996 COPS6Q7L5N1 327 aa12□□□□□ -0.49
HERC1-206ENST00000559996 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
HERC1-206ENST00000559996 XAGE3Q8WTP9 111 aa12□□□□□ -0.49
HERC1-206ENST00000559996 STK31Q9BXU1 1019 aa12□□□□□ -0.49
HERC1-206ENST00000559996 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
HERC1-206ENST00000559996 ATF7IPQ6VMQ6 1270 aa11.99□□□□□ -0.49
HERC1-206ENST00000559996 ADCY9O60503 1353 aa11.99□□□□□ -0.49
HERC1-206ENST00000559996 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
HERC1-206ENST00000559996 PTPRCP08575 1304 aa11.98□□□□□ -0.49
HERC1-206ENST00000559996 F6X3S4 739 aa11.98□□□□□ -0.49
HERC1-206ENST00000559996 CLCN6P51797 869 aa11.98□□□□□ -0.49
HERC1-206ENST00000559996 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
HERC1-206ENST00000559996 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
HERC1-206ENST00000559996 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
HERC1-206ENST00000559996 ABCC4O15439 1325 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
HERC1-206ENST00000559996 PDE3AQ14432 1141 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
HERC1-206ENST00000559996 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 IPO8O15397 1037 aaKnown RBP11.96□□□□□ -0.49
HERC1-206ENST00000559996 BAG6P46379 1132 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 HLFQ16534 295 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
HERC1-206ENST00000559996 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
HERC1-206ENST00000559996 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
HERC1-206ENST00000559996 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
HERC1-206ENST00000559996 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
HERC1-206ENST00000559996 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
HERC1-206ENST00000559996 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
HERC1-206ENST00000559996 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
HERC1-206ENST00000559996 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
HERC1-206ENST00000559996 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
HERC1-206ENST00000559996 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
HERC1-206ENST00000559996 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
HERC1-206ENST00000559996 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 ERVV-1B6SEH8 477 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 GNPATO15228 680 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 IGKV5-2P06315 115 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 IRX6P78412 446 aaPredicted RBP11.94□□□□□ -0.5
HERC1-206ENST00000559996 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
HERC1-206ENST00000559996 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
HERC1-206ENST00000559996 DNAAF4Q8WXU2 420 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
HERC1-206ENST00000559996 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
HERC1-206ENST00000559996 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
HERC1-206ENST00000559996 COL15A1P39059 1388 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 SLC15A2Q16348 729 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 GIGYF2Q6Y7W6 1299 aaKnown RBP11.93□□□□□ -0.5
HERC1-206ENST00000559996 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
HERC1-206ENST00000559996 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
HERC1-206ENST00000559996 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
HERC1-206ENST00000559996 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
HERC1-206ENST00000559996 SSFA2P28290 1259 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
HERC1-206ENST00000559996 ZNF34Q8IZ26 560 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 AK7Q96M32 723 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 SRP68Q9UHB9 627 aaKnown RBP11.92□□□□□ -0.5
HERC1-206ENST00000559996 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
HERC1-206ENST00000559996 NUP98P52948 1817 aa11.91□□□□□ -0.5
HERC1-206ENST00000559996 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
HERC1-206ENST00000559996 TRIM28Q13263 835 aaKnown RBP11.91□□□□□ -0.5
HERC1-206ENST00000559996 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
HERC1-206ENST00000559996 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
HERC1-206ENST00000559996 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
HERC1-206ENST00000559996 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms