RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 RRP7BPQ9NSQ0 103 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 DNMT3LQ9UJW3 386 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 ADGRB3O60242 1522 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 LOC100996750A0A140TA64 210 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 ERVH48-1M5A8F1 160 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 SPINT1O43278 529 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 GPR37L1O60883 481 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 KANK4Q5T7N3 995 aaPredicted RBP9.41□□□□□ -0.9
ZEB1-211ENST00000558440 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
ZEB1-211ENST00000558440 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 KRTAP4-6Q9BYQ5 205 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
ZEB1-211ENST00000558440 ABCC5O15440 1437 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 MSH6P52701 1360 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 TTLL8A6PVC2 850 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 APBB1O00213 710 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
ZEB1-211ENST00000558440 DAPK1P53355 1430 aa9.39□□□□□ -0.91
ZEB1-211ENST00000558440 NR1H3Q13133 447 aa9.39□□□□□ -0.91
ZEB1-211ENST00000558440 IDI1Q13907 227 aa9.39□□□□□ -0.91
ZEB1-211ENST00000558440 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
ZEB1-211ENST00000558440 JCADQ9P266 1359 aa9.38□□□□□ -0.91
ZEB1-211ENST00000558440 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
ZEB1-211ENST00000558440 LILRA1O75019 489 aa9.38□□□□□ -0.91
ZEB1-211ENST00000558440 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
ZEB1-211ENST00000558440 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
ZEB1-211ENST00000558440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.91
ZEB1-211ENST00000558440 COL16A1Q07092 1604 aaPredicted RBP9.38□□□□□ -0.91
ZEB1-211ENST00000558440 ANKRD30AQ9BXX3 1397 aa9.37□□□□□ -0.91
ZEB1-211ENST00000558440 GIGYF1O75420 1035 aaPredicted RBP9.37□□□□□ -0.91
ZEB1-211ENST00000558440 ADH1AP07327 375 aa9.37□□□□□ -0.91
ZEB1-211ENST00000558440 RELBQ01201 579 aa9.37□□□□□ -0.91
ZEB1-211ENST00000558440 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
ZEB1-211ENST00000558440 NOS1P29475 1434 aa9.37□□□□□ -0.91
ZEB1-211ENST00000558440 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
ZEB1-211ENST00000558440 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
ZEB1-211ENST00000558440 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-211ENST00000558440 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
ZEB1-211ENST00000558440 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
ZEB1-211ENST00000558440 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-211ENST00000558440 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
ZEB1-211ENST00000558440 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
ZEB1-211ENST00000558440 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-211ENST00000558440 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
ZEB1-211ENST00000558440 FGD6Q6ZV73 1430 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 TRIM52Q96A61 297 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 ZNF330Q9Y3S2 320 aaPredicted RBP9.35□□□□□ -0.91
ZEB1-211ENST00000558440 PLEKHG1Q9ULL1 1385 aa9.35□□□□□ -0.91
ZEB1-211ENST00000558440 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
ZEB1-211ENST00000558440 RPRD2Q5VT52 1461 aaKnown RBP9.34□□□□□ -0.91
ZEB1-211ENST00000558440 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
ZEB1-211ENST00000558440 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-211ENST00000558440 KDF1Q8NAX2 398 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-211ENST00000558440 INSM2Q96T92 566 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-211ENST00000558440 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
ZEB1-211ENST00000558440 SRCAPQ6ZRS2 3230 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 SPATA31A6Q5VVP1 1343 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 ZFYVE9O95405 1425 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 PTSQ03393 145 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 ZNF772Q68DY9 489 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-211ENST00000558440 ZNF395Q9H8N7 513 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-211ENST00000558440 AHDC1Q5TGY3 1603 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-211ENST00000558440 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
ZEB1-211ENST00000558440 NCOA3Q9Y6Q9 1424 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 LRP6O75581 1613 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 PTGIRP43119 386 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 POLMQ9NP87 494 aaPredicted RBP9.32□□□□□ -0.92
ZEB1-211ENST00000558440 ADGRL2O95490 1459 aa9.32□□□□□ -0.92
ZEB1-211ENST00000558440 ATF3P18847 181 aa9.31□□□□□ -0.92
ZEB1-211ENST00000558440 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
ZEB1-211ENST00000558440 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
ZEB1-211ENST00000558440 E9PCH4 1651 aa9.3□□□□□ -0.92
ZEB1-211ENST00000558440 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
ZEB1-211ENST00000558440 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
ZEB1-211ENST00000558440 TBX22Q9Y458 520 aa9.3□□□□□ -0.92
ZEB1-211ENST00000558440 TRPM2O94759 1503 aa9.3□□□□□ -0.92
ZEB1-211ENST00000558440 ANKRD50Q9ULJ7 1429 aa9.3□□□□□ -0.92
ZEB1-211ENST00000558440 UNC13BO14795 1591 aa9.29□□□□□ -0.92
ZEB1-211ENST00000558440 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-211ENST00000558440 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
ZEB1-211ENST00000558440 PRM3Q9NNZ6 103 aa9.29□□□□□ -0.92
ZEB1-211ENST00000558440 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 SLC35F4A4IF30 521 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 RXRBP28702 533 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 ADAMTS13Q76LX8 1427 aa9.28□□□□□ -0.92
ZEB1-211ENST00000558440 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
ZEB1-211ENST00000558440 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms