RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
TPM1-209ENST00000558072 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
TPM1-209ENST00000558072 ARFGEF2Q9Y6D5 1785 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
TPM1-209ENST00000558072 HSP90AB3PQ58FF7 597 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 TTLL7Q6ZT98 887 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 RIC3Q7Z5B4 369 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
TPM1-209ENST00000558072 DDX19BQ9UMR2 479 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 COL15A1P39059 1388 aa15.7■□□□□ 0.1
TPM1-209ENST00000558072 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
TPM1-209ENST00000558072 PLIN1O60240 522 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 ADRA2BP18089 450 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 PLBD2Q8NHP8 589 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
TPM1-209ENST00000558072 ABCC4O15439 1325 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 QSER1Q2KHR3 1735 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 PXDNLA1KZ92 1463 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 IBTKQ9P2D0 1353 aaPredicted RBP15.68■□□□□ 0.1
TPM1-209ENST00000558072 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 RPS6KA4O75676 772 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
TPM1-209ENST00000558072 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 ARXQ96QS3 562 aa15.68■□□□□ 0.1
TPM1-209ENST00000558072 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
TPM1-209ENST00000558072 CASZ1Q86V15 1759 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
TPM1-209ENST00000558072 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
TPM1-209ENST00000558072 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 TFCP2L1Q9NZI6 479 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
TPM1-209ENST00000558072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
TPM1-209ENST00000558072 ALDH1L1O75891 902 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 R3HDM1Q15032 1099 aaKnown RBP15.66■□□□□ 0.1
TPM1-209ENST00000558072 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 COL23A1Q86Y22 540 aaPredicted RBP15.66■□□□□ 0.1
TPM1-209ENST00000558072 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 SRCIN1Q9C0H9 1055 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 ZBTB3Q9H5J0 574 aa15.66■□□□□ 0.1
TPM1-209ENST00000558072 SOCS7O14512 581 aa15.65■□□□□ 0.1
TPM1-209ENST00000558072 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
TPM1-209ENST00000558072 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
TPM1-209ENST00000558072 ARHGEF1Q92888 912 aaKnown RBP15.65■□□□□ 0.1
TPM1-209ENST00000558072 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
TPM1-209ENST00000558072 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
TPM1-209ENST00000558072 ADCY9O60503 1353 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 F6X3S4 739 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 MSH5O43196 834 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 SSFA2P28290 1259 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 FKBP8Q14318 412 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 HLFQ16534 295 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 MSL1Q68DK7 614 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 CLEC4GQ6UXB4 293 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
TPM1-209ENST00000558072 METTL22Q9BUU2 404 aaPredicted RBP15.64■□□□□ 0.09
TPM1-209ENST00000558072 ATP10DQ9P241 1426 aa15.64■□□□□ 0.09
TPM1-209ENST00000558072 ANKRD36CQ5JPF3 1778 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 GNAI3P08754 354 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 NUP98P52948 1817 aa15.63■□□□□ 0.09
TPM1-209ENST00000558072 ZPR1O75312 459 aa15.62■□□□□ 0.09
TPM1-209ENST00000558072 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
TPM1-209ENST00000558072 HSP90B1P14625 803 aaKnown RBP15.62■□□□□ 0.09
TPM1-209ENST00000558072 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
TPM1-209ENST00000558072 GIGYF2Q6Y7W6 1299 aaKnown RBP15.62■□□□□ 0.09
TPM1-209ENST00000558072 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
TPM1-209ENST00000558072 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
TPM1-209ENST00000558072 RFC4P35249 363 aa15.61■□□□□ 0.09
TPM1-209ENST00000558072 TCIRG1Q13488 830 aa15.61■□□□□ 0.09
TPM1-209ENST00000558072 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
TPM1-209ENST00000558072 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
TPM1-209ENST00000558072 USP42Q9H9J4 1324 aaKnown RBP15.61■□□□□ 0.09
TPM1-209ENST00000558072 RLBP1P12271 317 aa15.6■□□□□ 0.09
TPM1-209ENST00000558072 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
TPM1-209ENST00000558072 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
TPM1-209ENST00000558072 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
TPM1-209ENST00000558072 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
TPM1-209ENST00000558072 GPTP24298 496 aa15.59■□□□□ 0.09
TPM1-209ENST00000558072 PARP10Q53GL7 1025 aa15.59■□□□□ 0.09
TPM1-209ENST00000558072 BICDL1Q6ZP65 573 aa15.59■□□□□ 0.09
TPM1-209ENST00000558072 MYD88Q99836 296 aa15.59■□□□□ 0.09
TPM1-209ENST00000558072 PPP4R2Q9NY27 417 aa15.59■□□□□ 0.09
TPM1-209ENST00000558072 C9orf78Q9NZ63 289 aaPredicted RBP15.59■□□□□ 0.09
TPM1-209ENST00000558072 ATP5J2-PTCD1G3V325 749 aa15.58■□□□□ 0.08
TPM1-209ENST00000558072 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
TPM1-209ENST00000558072 ZBTB7AO95365 584 aa15.58■□□□□ 0.08
TPM1-209ENST00000558072 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
TPM1-209ENST00000558072 CWC25Q9NXE8 425 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms