RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 PCNTO95613 3336 aa13.47□□□□□ -0.25
HNRNPC-218ENST00000555215 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
HNRNPC-218ENST00000555215 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-218ENST00000555215 VEGFAP15692 232 aaPredicted RBP13.46□□□□□ -0.25
HNRNPC-218ENST00000555215 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-218ENST00000555215 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
HNRNPC-218ENST00000555215 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-218ENST00000555215 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
HNRNPC-218ENST00000555215 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
HNRNPC-218ENST00000555215 KLRG2A4D1S0 409 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 DDNO94850 711 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 ST5P78524 1137 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 NGEFQ8N5V2 710 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 MASTLQ96GX5 879 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
HNRNPC-218ENST00000555215 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
HNRNPC-218ENST00000555215 NPHP1O15259 732 aa13.42□□□□□ -0.26
HNRNPC-218ENST00000555215 TTLL7Q6ZT98 887 aa13.42□□□□□ -0.26
HNRNPC-218ENST00000555215 EIF4A1P60842 406 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-218ENST00000555215 COL13A1Q5TAT6 717 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-218ENST00000555215 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
HNRNPC-218ENST00000555215 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-218ENST00000555215 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
HNRNPC-218ENST00000555215 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
HNRNPC-218ENST00000555215 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-218ENST00000555215 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-218ENST00000555215 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
HNRNPC-218ENST00000555215 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 NPR1P16066 1061 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
HNRNPC-218ENST00000555215 GPTP24298 496 aa13.38□□□□□ -0.27
HNRNPC-218ENST00000555215 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
HNRNPC-218ENST00000555215 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
HNRNPC-218ENST00000555215 MYL6BP14649 208 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
HNRNPC-218ENST00000555215 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 RGL2O15211 777 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 ANXA1P04083 346 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 PDIA6Q15084 440 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
HNRNPC-218ENST00000555215 COL4A5P29400 1685 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 ERVV-1B6SEH8 477 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-218ENST00000555215 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
HNRNPC-218ENST00000555215 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-218ENST00000555215 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-218ENST00000555215 NUP98P52948 1817 aa13.34□□□□□ -0.27
HNRNPC-218ENST00000555215 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 NTSR2O95665 410 aa13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 ITGBL1O95965 494 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
HNRNPC-218ENST00000555215 FZD9O00144 591 aa13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 RIPK4P57078 832 aa13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
HNRNPC-218ENST00000555215 NEFMP07197 916 aa13.31□□□□□ -0.28
HNRNPC-218ENST00000555215 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms