RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 INTS6LQ5JSJ4 861 aaKnown RBP3.8□□□□□ -1.8
CPSF6-207ENST00000551516 CC2D2BQ6DHV5 1058 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 ANKLE2Q86XL3 938 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 SIX5Q8N196 739 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 MPNDQ8N594 471 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 TPCN2Q8NHX9 752 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 MTMR7Q9Y216 660 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 PCDHGA11Q9Y5H2 935 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 ZC3H13Q5T200 1668 aaKnown RBP3.8□□□□□ -1.8
CPSF6-207ENST00000551516 TOM1O60784 492 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 ATP2B4P23634 1241 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 MFAP1P55081 439 aaKnown RBP3.79□□□□□ -1.8
CPSF6-207ENST00000551516 IDI1Q13907 227 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 THEMISQ8N1K5 641 aaPredicted RBP3.79□□□□□ -1.8
CPSF6-207ENST00000551516 CDK15Q96Q40 435 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 HINFPQ9BQA5 517 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 KIAA1024Q9UPX6 916 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 GNEQ9Y223 722 aaKnown RBP3.79□□□□□ -1.8
CPSF6-207ENST00000551516 ARHGEF5Q12774 1597 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 CCDC141Q6ZP82 1450 aa3.79□□□□□ -1.8
CPSF6-207ENST00000551516 ABCC5O15440 1437 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 ZFYVE9O95405 1425 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 TMEM2Q9UHN6 1383 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 CLTCQ00610 1675 aaKnown RBP3.78□□□□□ -1.8
CPSF6-207ENST00000551516 RNF17Q9BXT8 1623 aaKnown RBP3.78□□□□□ -1.8
CPSF6-207ENST00000551516 UGGT1Q9NYU2 1555 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 MAST1Q9Y2H9 1570 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 SFI1A8K8P3 1242 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 M0R2N6 131 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 BACH1O14867 736 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 DKK1O94907 266 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 FSHRP23945 695 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 SLC19A1P41440 591 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 MYT1Q01538 1121 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 NR5A1Q13285 461 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 LIAT1Q6ZQX7 453 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 NPM2Q86SE8 214 aaKnown RBP3.78□□□□□ -1.8
CPSF6-207ENST00000551516 TXNDC2Q86VQ3 553 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 CCDC116Q8IYX3 515 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 LMTK2Q8IWU2 1503 aa3.78□□□□□ -1.8
CPSF6-207ENST00000551516 WASHC2CQ9Y4E1 1318 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 WNT7AO00755 349 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 SIAH2O43255 324 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 PRMT3O60678 531 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 ADH1CP00326 375 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 KCNA6P17658 529 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 GRM5P41594 1212 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 ERVK-9P63128 1117 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 MMRN1Q13201 1228 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 CCDC27Q2M243 656 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 IFFO2Q5TF58 517 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 PHLDB3Q6NSJ2 640 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.77□□□□□ -1.81
CPSF6-207ENST00000551516 C1orf216Q8TAB5 229 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 CYLDQ9NQC7 956 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 TMPRSS4Q9NRS4 437 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 PGPEP1Q9NXJ5 209 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 TLL2Q9Y6L7 1015 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 SCAF11Q99590 1463 aaKnown RBP3.77□□□□□ -1.81
CPSF6-207ENST00000551516 ADAMTS13Q76LX8 1427 aa3.77□□□□□ -1.81
CPSF6-207ENST00000551516 TMEM94Q12767 1356 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 PRDM15P57071 1507 aaPredicted RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 ADGBQ8N7X0 1667 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 LRRC9Q6ZRR7 1453 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 SCTRP47872 440 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 PIP4K2BP78356 416 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 ESCO1Q5FWF5 840 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 PPP1R26Q5T8A7 1209 aaPredicted RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 SPRYD7Q5W111 196 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 SND1Q7KZF4 910 aaKnown RBP eCLIP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 CYP2U1Q7Z449 544 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 ZNF598Q86UK7 904 aaKnown RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 ZNF784Q8NCA9 323 aaPredicted RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 MRGPRX2Q96LB1 330 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 PRIMPOLQ96LW4 560 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 OSBPL3Q9H4L5 887 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 ZNF358Q9NW07 568 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 CXXC1Q9P0U4 656 aaPredicted RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 SLAIN2Q9P270 581 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 EMILIN1Q9Y6C2 1016 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 WASF2Q9Y6W5 498 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 XIRP1Q702N8 1843 aaKnown RBP3.76□□□□□ -1.81
CPSF6-207ENST00000551516 LRP6O75581 1613 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 MTUS2Q5JR59 1369 aa3.76□□□□□ -1.81
CPSF6-207ENST00000551516 SUPT6HQ7KZ85 1726 aaKnown RBP3.75□□□□□ -1.81
CPSF6-207ENST00000551516 EHBP1L1Q8N3D4 1523 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 EP400Q96L91 3159 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 PTCD1O75127 700 aaKnown RBP3.75□□□□□ -1.81
CPSF6-207ENST00000551516 ALDH1A1P00352 501 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 GNRH1P01148 92 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 GDF10P55107 478 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 ZNF697Q5TEC3 545 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 TSEN2Q8NCE0 465 aaKnown RBP3.75□□□□□ -1.81
CPSF6-207ENST00000551516 RGS22Q8NE09 1264 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 GAS2L2Q8NHY3 880 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.75□□□□□ -1.819e-7■■■■■ 39.5
CPSF6-207ENST00000551516 PTPRUQ92729 1446 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 NCOA3Q9Y6Q9 1424 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 SYNMO15061 1565 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 NWD1Q149M9 1564 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms