RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 RFC4P35249 363 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 FLIIQ13045 1269 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 ARXQ96QS3 562 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 SMC4Q9NTJ3 1288 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 ADCY9O60503 1353 aa20.89■□□□□ 0.93
LIMS2-217ENST00000545738 MSH5O43196 834 aa20.89■□□□□ 0.93
LIMS2-217ENST00000545738 ZNF428Q96B54 188 aa20.89■□□□□ 0.93
LIMS2-217ENST00000545738 MAP3K15Q6ZN16 1313 aa20.88■□□□□ 0.93
LIMS2-217ENST00000545738 FKBP8Q14318 412 aa20.88■□□□□ 0.93
LIMS2-217ENST00000545738 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
LIMS2-217ENST00000545738 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
LIMS2-217ENST00000545738 COL24A1Q17RW2 1714 aa20.87■□□□□ 0.93
LIMS2-217ENST00000545738 ZBTB7AO95365 584 aa20.87■□□□□ 0.93
LIMS2-217ENST00000545738 TNNQ9UQP3 1299 aa20.86■□□□□ 0.93
LIMS2-217ENST00000545738 A0A087WZG4 1122 aa20.85■□□□□ 0.93
LIMS2-217ENST00000545738 BRPF1P55201 1214 aaPredicted RBP20.85■□□□□ 0.93
LIMS2-217ENST00000545738 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 PI4KAP2A4QPH2 592 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 F6X3S4 739 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 ZPR1O75312 459 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 PI4KAP1Q8N8J0 262 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 FKBP5Q13451 457 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-217ENST00000545738 TBC1D9BQ66K14 1250 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 KIF6Q6ZMV9 814 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 PLBD2Q8NHP8 589 aa20.84■□□□□ 0.93
LIMS2-217ENST00000545738 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
LIMS2-217ENST00000545738 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.92
LIMS2-217ENST00000545738 GIGYF2Q6Y7W6 1299 aaKnown RBP20.82■□□□□ 0.92
LIMS2-217ENST00000545738 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
LIMS2-217ENST00000545738 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
LIMS2-217ENST00000545738 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
LIMS2-217ENST00000545738 ATF5Q9Y2D1 282 aaPredicted RBP20.81■□□□□ 0.92
LIMS2-217ENST00000545738 DDR1Q08345 913 aa20.81■□□□□ 0.92
LIMS2-217ENST00000545738 NFIXQ14938 502 aa20.81■□□□□ 0.92
LIMS2-217ENST00000545738 KSR2Q6VAB6 950 aa20.81■□□□□ 0.92
LIMS2-217ENST00000545738 SGIP1Q9BQI5 828 aa20.81■□□□□ 0.92
LIMS2-217ENST00000545738 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
LIMS2-217ENST00000545738 ATP10DQ9P241 1426 aa20.8■□□□□ 0.92
LIMS2-217ENST00000545738 GPTP24298 496 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 TM4SF1P30408 202 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 CLEC4GQ6UXB4 293 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 RIC3Q7Z5B4 369 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 SLC16A10Q8TF71 515 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 MTFR1LQ9H019 292 aa20.79■□□□□ 0.92
LIMS2-217ENST00000545738 AFDNP55196 1824 aaKnown RBP20.79■□□□□ 0.92
LIMS2-217ENST00000545738 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 IGKV5-2P06315 115 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 PTGER2P43116 358 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 ZNF34Q8IZ26 560 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
LIMS2-217ENST00000545738 PLIN1O60240 522 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 TRIM27P14373 513 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 TCIRG1Q13488 830 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 UTRNP46939 3433 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 PTPRCP08575 1304 aa20.78■□□□□ 0.92
LIMS2-217ENST00000545738 MMP10P09238 476 aa20.77■□□□□ 0.92
LIMS2-217ENST00000545738 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
LIMS2-217ENST00000545738 MYD88Q99836 296 aa20.77■□□□□ 0.92
LIMS2-217ENST00000545738 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
LIMS2-217ENST00000545738 KIF16BQ96L93 1317 aa20.77■□□□□ 0.92
LIMS2-217ENST00000545738 NRXN2Q9P2S2 1712 aa20.77■□□□□ 0.91
LIMS2-217ENST00000545738 POLRMTO00411 1230 aaKnown RBP20.76■□□□□ 0.91
LIMS2-217ENST00000545738 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
LIMS2-217ENST00000545738 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
LIMS2-217ENST00000545738 NLGN1Q8N2Q7 840 aa20.76■□□□□ 0.91
LIMS2-217ENST00000545738 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
LIMS2-217ENST00000545738 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
LIMS2-217ENST00000545738 N4BP2Q86UW6 1770 aaPredicted RBP20.76■□□□□ 0.91
LIMS2-217ENST00000545738 RGL2O15211 777 aa20.75■□□□□ 0.91
LIMS2-217ENST00000545738 RLBP1P12271 317 aa20.75■□□□□ 0.91
LIMS2-217ENST00000545738 BEND3Q5T5X7 828 aa20.75■□□□□ 0.91
LIMS2-217ENST00000545738 ZNF652Q9Y2D9 606 aa20.75■□□□□ 0.91
LIMS2-217ENST00000545738 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
LIMS2-217ENST00000545738 NLRP10Q86W26 655 aa20.74■□□□□ 0.91
LIMS2-217ENST00000545738 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
LIMS2-217ENST00000545738 ABCC4O15439 1325 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 SUSD4Q5VX71 490 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 SLC4A10Q6U841 1118 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 ARHGAP45Q92619 1136 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 SYNE4Q8N205 404 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 CCDC24Q8N4L8 307 aa20.73■□□□□ 0.91
LIMS2-217ENST00000545738 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
LIMS2-217ENST00000545738 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
LIMS2-217ENST00000545738 C20orf194Q5TEA3 1177 aa20.72■□□□□ 0.91
LIMS2-217ENST00000545738 ZKSCAN2Q63HK3 967 aa20.72■□□□□ 0.91
LIMS2-217ENST00000545738 SETDB2Q96T68 719 aa20.72■□□□□ 0.91
LIMS2-217ENST00000545738 NTSR2O95665 410 aa20.71■□□□□ 0.91
LIMS2-217ENST00000545738 SERPINB2P05120 415 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 HSP90AB3PQ58FF7 597 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
LIMS2-217ENST00000545738 ANKRD31Q8N7Z5 1873 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 ABCC12Q96J65 1359 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
LIMS2-217ENST00000545738 NUTM1Q86Y26 1132 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms