RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ZWINTO95229 277 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 LRSAM1Q6UWE0 723 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 ATF3P18847 181 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 IFT74Q96LB3 600 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 ANAPC4Q9UJX5 808 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 RASSF4Q9H2L5 321 aa22.21■■□□□ 1.15
HDAC4-215ENST00000543185 CTAGE15A4D2H0 777 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 CTAGE8P0CG41 777 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 CTAGE6Q86UF2 777 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 CTAGE4Q8IX94 777 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 CAPN2P17655 700 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 KIF14Q15058 1648 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 STX6O43752 255 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 USP37Q86T82 979 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 RBM25P49756 843 aaKnown RBP22.2■■□□□ 1.14
HDAC4-215ENST00000543185 ARFGAP2Q8N6H7 521 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 FCHSD2O94868 740 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 GNG11P61952 73 aa22.2■■□□□ 1.14
HDAC4-215ENST00000543185 TSGA10Q9BZW7 698 aa22.19■■□□□ 1.14
HDAC4-215ENST00000543185 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
HDAC4-215ENST00000543185 BCAR3O75815 825 aa22.19■■□□□ 1.14
HDAC4-215ENST00000543185 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
HDAC4-215ENST00000543185 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
HDAC4-215ENST00000543185 TBC1D5Q92609 795 aa22.19■■□□□ 1.14
HDAC4-215ENST00000543185 CYLC1P35663 651 aaPredicted RBP22.18■■□□□ 1.14
HDAC4-215ENST00000543185 OTUD6BQ8N6M0 293 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 SPAG1Q07617 926 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 CALML4Q96GE6 196 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 TCP11L1Q9NUJ3 509 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 MACROD2A1Z1Q3 448 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 KDM4AO75164 1064 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 ZSCAN23Q3MJ62 389 aa22.18■■□□□ 1.14
HDAC4-215ENST00000543185 CCDC129Q6ZRS4 1044 aa22.17■■□□□ 1.14
HDAC4-215ENST00000543185 SLC12A7Q9Y666 1083 aa22.17■■□□□ 1.14
HDAC4-215ENST00000543185 MKRN1Q9UHC7 482 aaKnown RBP22.17■■□□□ 1.14
HDAC4-215ENST00000543185 RSPH14Q9UHP6 348 aa22.17■■□□□ 1.14
HDAC4-215ENST00000543185 PABPN1LA6NDY0 278 aaKnown RBP22.17■■□□□ 1.14
HDAC4-215ENST00000543185 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
HDAC4-215ENST00000543185 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
HDAC4-215ENST00000543185 SMAP1Q8IYB5 467 aaPredicted RBP22.16■■□□□ 1.14
HDAC4-215ENST00000543185 FAM200AQ8TCP9 573 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 ALDH3A1P30838 453 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 FSIP1Q8NA03 581 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 AK9Q5TCS8 1911 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 MTIF2P46199 727 aaKnown RBP22.16■■□□□ 1.14
HDAC4-215ENST00000543185 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 MAP3K9P80192 1104 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 SH2D4BQ5SQS7 431 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 NBPF11Q86T75 865 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 ATP5DP30049 168 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 OGFRQ9NZT2 677 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 SAMD15Q9P1V8 674 aa22.16■■□□□ 1.14
HDAC4-215ENST00000543185 LACTBP83111 547 aaPredicted RBP22.15■■□□□ 1.14
HDAC4-215ENST00000543185 CCDC96Q2M329 555 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 IQCA1Q86XH1 822 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 LMBR1Q8WVP7 490 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 TRMT1Q9NXH9 659 aaKnown RBP22.15■■□□□ 1.14
HDAC4-215ENST00000543185 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 SSRP1Q08945 709 aaKnown RBP22.15■■□□□ 1.14
HDAC4-215ENST00000543185 PTPRCP08575 1304 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 SLU7O95391 586 aaKnown RBP22.15■■□□□ 1.14
HDAC4-215ENST00000543185 RAB3IL1Q8TBN0 382 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 MPHOSPH10O00566 681 aaKnown RBP22.15■■□□□ 1.14
HDAC4-215ENST00000543185 TACC1O75410 805 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 KCNG4Q8TDN1 519 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 CCDC160A6NGH7 325 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 ATP11AP98196 1134 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 HDXQ7Z353 690 aa22.15■■□□□ 1.14
HDAC4-215ENST00000543185 PIBF1Q8WXW3 757 aa22.14■■□□□ 1.14
HDAC4-215ENST00000543185 RALGAPBQ86X10 1494 aa22.14■■□□□ 1.14
HDAC4-215ENST00000543185 SETDB1Q15047 1291 aa22.14■■□□□ 1.14
HDAC4-215ENST00000543185 SIL1Q9H173 461 aa22.14■■□□□ 1.13
HDAC4-215ENST00000543185 LRP2BPQ9P2M1 347 aa22.14■■□□□ 1.13
HDAC4-215ENST00000543185 TSR2Q969E8 191 aaKnown RBP22.14■■□□□ 1.13
HDAC4-215ENST00000543185 KRT86O43790 486 aa22.14■■□□□ 1.13
HDAC4-215ENST00000543185 CCDC102BQ68D86 513 aa22.14■■□□□ 1.13
HDAC4-215ENST00000543185 CEP57Q86XR8 500 aa22.14■■□□□ 1.13
HDAC4-215ENST00000543185 MXRA7P84157 204 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 TUBB2AQ13885 445 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 CATIPQ7Z7H3 387 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 TUBB2BQ9BVA1 445 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 SPG7Q9UQ90 795 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 NLRP6P59044 892 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 NOLC1Q14978 699 aaKnown RBP eCLIP22.13■■□□□ 1.13
HDAC4-215ENST00000543185 CAMSAP2Q08AD1 1489 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 CCDC194A0A1B0GVG4 234 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 CLGNO14967 610 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 KRT83P78385 493 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 RBM28Q9NW13 759 aaKnown RBP22.13■■□□□ 1.13
HDAC4-215ENST00000543185 TBC1D2Q9BYX2 928 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 TMCO5BA8MYB1 307 aa22.13■■□□□ 1.13
HDAC4-215ENST00000543185 MAP4K4O95819 1239 aaPredicted RBP22.13■■□□□ 1.13
HDAC4-215ENST00000543185 SPDYE4A6NLX3 237 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms