RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-206ENST00000535668 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
CLSTN3-206ENST00000535668 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
CLSTN3-206ENST00000535668 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
CLSTN3-206ENST00000535668 NBPF26B4DH59 902 aa14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 ST5P78524 1137 aa14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 TAF7Q15545 349 aaPredicted RBP14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 NBPF10Q6P3W6 841 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 NPM2Q86SE8 214 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 NBPF15Q8N660 670 aa14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
CLSTN3-206ENST00000535668 SLX4Q8IY92 1834 aa14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 ERVV-1B6SEH8 477 aa14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 TPTE2Q6XPS3 522 aa14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 BICDL1Q6ZP65 573 aa14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 RTF1Q92541 710 aaKnown RBP14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 SNED1Q8TER0 1413 aa14.97□□□□□ -0.01
CLSTN3-206ENST00000535668 C21orf2O43822 256 aa14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 U2AF1L5P0DN76 240 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 NPR1P16066 1061 aa14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 U2AF1Q01081 240 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 CRY2Q49AN0 593 aa14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 ERFEQ4G0M1 354 aa14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-206ENST00000535668 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.02
CLSTN3-206ENST00000535668 ZNF622Q969S3 477 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLSTN3-206ENST00000535668 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
CLSTN3-206ENST00000535668 GRIPAP1Q4V328 841 aa14.94□□□□□ -0.02
CLSTN3-206ENST00000535668 MCM10Q7L590 875 aa14.94□□□□□ -0.02
CLSTN3-206ENST00000535668 NBPF5PQ86XG9 351 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-206ENST00000535668 SCN4AP35499 1836 aa14.94□□□□□ -0.02
CLSTN3-206ENST00000535668 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
CLSTN3-206ENST00000535668 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
CLSTN3-206ENST00000535668 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-206ENST00000535668 RTKN2Q8IZC4 609 aa14.93□□□□□ -0.02
CLSTN3-206ENST00000535668 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
CLSTN3-206ENST00000535668 IQCA1LA6NCM1 817 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 ALDH1B1P30837 517 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 FKBP4Q02790 459 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 CCDC93Q567U6 631 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 CC2D2BQ6DHV5 1058 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 PSMD1Q99460 953 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 PASKQ96RG2 1323 aa14.92□□□□□ -0.02
CLSTN3-206ENST00000535668 LAMB4A4D0S4 1761 aa14.91□□□□□ -0.02
CLSTN3-206ENST00000535668 KDM3BQ7LBC6 1761 aa14.91□□□□□ -0.02
CLSTN3-206ENST00000535668 HTRA3P83110 453 aa14.91□□□□□ -0.02
CLSTN3-206ENST00000535668 FZD9O00144 591 aa14.9□□□□□ -0.02
CLSTN3-206ENST00000535668 EIF4A1P60842 406 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-206ENST00000535668 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-206ENST00000535668 NIP7Q9Y221 180 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLSTN3-206ENST00000535668 LRP10Q7Z4F1 713 aa14.89□□□□□ -0.03
CLSTN3-206ENST00000535668 LDHDQ86WU2 507 aa14.89□□□□□ -0.03
CLSTN3-206ENST00000535668 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
CLSTN3-206ENST00000535668 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
CLSTN3-206ENST00000535668 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
CLSTN3-206ENST00000535668 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 ITGBL1O95965 494 aaPredicted RBP14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 DCTN1Q14203 1278 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 NFE2L2Q16236 605 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 HLFQ16534 295 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 ZNF34Q8IZ26 560 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 CCDC24Q8N4L8 307 aa14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
CLSTN3-206ENST00000535668 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
CLSTN3-206ENST00000535668 VPS33BQ9H267 617 aa14.87□□□□□ -0.03
CLSTN3-206ENST00000535668 RNF123Q5XPI4 1314 aa14.87□□□□□ -0.03
CLSTN3-206ENST00000535668 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
CLSTN3-206ENST00000535668 PIP4K2AP48426 406 aaPredicted RBP14.86□□□□□ -0.03
CLSTN3-206ENST00000535668 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
CLSTN3-206ENST00000535668 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
CLSTN3-206ENST00000535668 NUP98P52948 1817 aa14.86□□□□□ -0.03
CLSTN3-206ENST00000535668 NPHP1O15259 732 aa14.85□□□□□ -0.03
CLSTN3-206ENST00000535668 NEFMP07197 916 aa14.85□□□□□ -0.03
CLSTN3-206ENST00000535668 GIGYF2Q6Y7W6 1299 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-206ENST00000535668 PNMA8AQ86V59 439 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-206ENST00000535668 GPC2Q8N158 579 aa14.85□□□□□ -0.03
CLSTN3-206ENST00000535668 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-206ENST00000535668 PDIA6Q15084 440 aa14.84□□□□□ -0.03
CLSTN3-206ENST00000535668 CNTNAP1P78357 1384 aa14.84□□□□□ -0.03
CLSTN3-206ENST00000535668 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 HACL1Q9UJ83 578 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 UBN2Q6ZU65 1347 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 ABCC12Q96J65 1359 aa14.83□□□□□ -0.04
CLSTN3-206ENST00000535668 NTSR2O95665 410 aa14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 HSPA1AP0DMV8 641 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 HSPA1BP0DMV9 641 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 ZNF277Q9NRM2 450 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 ZNF541Q9H0D2 1346 aa14.82□□□□□ -0.04
CLSTN3-206ENST00000535668 CACNA1SQ13698 1873 aa14.81□□□□□ -0.04
CLSTN3-206ENST00000535668 RALBP1Q15311 655 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms