RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
CCDC84-205ENST00000528088 YY1P25490 414 aa14.39□□□□□ -0.11
CCDC84-205ENST00000528088 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
CCDC84-205ENST00000528088 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
CCDC84-205ENST00000528088 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
CCDC84-205ENST00000528088 MS4A3Q96HJ5 214 aa14.39□□□□□ -0.11
CCDC84-205ENST00000528088 CEMIPQ8WUJ3 1361 aa14.39□□□□□ -0.11
CCDC84-205ENST00000528088 SSFA2P28290 1259 aa14.38□□□□□ -0.11
CCDC84-205ENST00000528088 UBR3Q6ZT12 1888 aa14.38□□□□□ -0.11
CCDC84-205ENST00000528088 UTRNP46939 3433 aa14.38□□□□□ -0.11
CCDC84-205ENST00000528088 LAS1LQ9Y4W2 734 aaKnown RBP14.38□□□□□ -0.11
CCDC84-205ENST00000528088 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
CCDC84-205ENST00000528088 HMGB2P26583 209 aaKnown RBP14.37□□□□□ -0.11
CCDC84-205ENST00000528088 TAF7Q15545 349 aaPredicted RBP14.37□□□□□ -0.11
CCDC84-205ENST00000528088 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
CCDC84-205ENST00000528088 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
CCDC84-205ENST00000528088 UBR2Q8IWV8 1755 aa14.35□□□□□ -0.11
CCDC84-205ENST00000528088 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
CCDC84-205ENST00000528088 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
CCDC84-205ENST00000528088 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
CCDC84-205ENST00000528088 CALD1Q05682 793 aaKnown RBP14.34□□□□□ -0.11
CCDC84-205ENST00000528088 GPR162Q16538 588 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 RC3H1Q5TC82 1133 aaKnown RBP14.34□□□□□ -0.11
CCDC84-205ENST00000528088 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
CCDC84-205ENST00000528088 SLC24A3Q9HC58 644 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 CNTNAP4Q9C0A0 1308 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
CCDC84-205ENST00000528088 RPS6KA4O75676 772 aa14.33□□□□□ -0.12
CCDC84-205ENST00000528088 CRKLP46109 303 aaKnown RBP14.33□□□□□ -0.12
CCDC84-205ENST00000528088 MKRN3Q13064 507 aaKnown RBP14.33□□□□□ -0.12
CCDC84-205ENST00000528088 DNAJC10Q8IXB1 793 aa14.33□□□□□ -0.12
CCDC84-205ENST00000528088 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
CCDC84-205ENST00000528088 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
CCDC84-205ENST00000528088 KCPQ6ZWJ8 1503 aa14.32□□□□□ -0.12
CCDC84-205ENST00000528088 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC84-205ENST00000528088 TJP1Q07157 1748 aa14.32□□□□□ -0.12
CCDC84-205ENST00000528088 KCNQ3O43525 872 aa14.31□□□□□ -0.12
CCDC84-205ENST00000528088 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
CCDC84-205ENST00000528088 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
CCDC84-205ENST00000528088 COL5A3P25940 1745 aaPredicted RBP14.31□□□□□ -0.12
CCDC84-205ENST00000528088 ZNF831Q5JPB2 1677 aa14.31□□□□□ -0.12
CCDC84-205ENST00000528088 MMP10P09238 476 aa14.31□□□□□ -0.12
CCDC84-205ENST00000528088 SRP68Q9UHB9 627 aaKnown RBP14.31□□□□□ -0.12
CCDC84-205ENST00000528088 WWC3Q9ULE0 1092 aa14.31□□□□□ -0.12
CCDC84-205ENST00000528088 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
CCDC84-205ENST00000528088 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
CCDC84-205ENST00000528088 GYS1P13807 737 aa14.3□□□□□ -0.12
CCDC84-205ENST00000528088 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
CCDC84-205ENST00000528088 GOLGB1Q14789 3259 aaKnown RBP14.29□□□□□ -0.12
CCDC84-205ENST00000528088 ZMYND10O75800 440 aa14.29□□□□□ -0.12
CCDC84-205ENST00000528088 CYP19A1P11511 503 aaPredicted RBP14.29□□□□□ -0.12
CCDC84-205ENST00000528088 RFC4P35249 363 aa14.29□□□□□ -0.12
CCDC84-205ENST00000528088 GNAI1P63096 354 aa14.29□□□□□ -0.12
CCDC84-205ENST00000528088 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
CCDC84-205ENST00000528088 SMYD5Q6GMV2 418 aa14.29□□□□□ -0.12
CCDC84-205ENST00000528088 STARD3NLO95772 234 aa14.28□□□□□ -0.12
CCDC84-205ENST00000528088 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.12
CCDC84-205ENST00000528088 NGEFQ8N5V2 710 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 TEX13AQ9BXU3 409 aaPredicted RBP14.27□□□□□ -0.12
CCDC84-205ENST00000528088 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 IFT57Q9NWB7 429 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.12
CCDC84-205ENST00000528088 ZNF330Q9Y3S2 320 aaPredicted RBP14.27□□□□□ -0.12
CCDC84-205ENST00000528088 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
CCDC84-205ENST00000528088 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
CCDC84-205ENST00000528088 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
CCDC84-205ENST00000528088 NLGN1Q8N2Q7 840 aa14.26□□□□□ -0.13
CCDC84-205ENST00000528088 ZNF784Q8NCA9 323 aaPredicted RBP14.26□□□□□ -0.13
CCDC84-205ENST00000528088 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
CCDC84-205ENST00000528088 CHL1O00533 1208 aa14.25□□□□□ -0.13
CCDC84-205ENST00000528088 TIE1P35590 1138 aa14.25□□□□□ -0.13
CCDC84-205ENST00000528088 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
CCDC84-205ENST00000528088 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC84-205ENST00000528088 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
CCDC84-205ENST00000528088 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
CCDC84-205ENST00000528088 USP42Q9H9J4 1324 aaKnown RBP14.25□□□□□ -0.13
CCDC84-205ENST00000528088 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
CCDC84-205ENST00000528088 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
CCDC84-205ENST00000528088 PRAMEF22A3QJZ6 481 aa14.24□□□□□ -0.13
CCDC84-205ENST00000528088 DDR1Q08345 913 aa14.24□□□□□ -0.13
CCDC84-205ENST00000528088 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
CCDC84-205ENST00000528088 IL16Q14005 1332 aa14.23□□□□□ -0.13
CCDC84-205ENST00000528088 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
CCDC84-205ENST00000528088 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
CCDC84-205ENST00000528088 USPL1Q5W0Q7 1092 aa14.23□□□□□ -0.13
CCDC84-205ENST00000528088 TSR2Q969E8 191 aaKnown RBP14.23□□□□□ -0.13
CCDC84-205ENST00000528088 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
CCDC84-205ENST00000528088 A0A0G2JLW4 131 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 GRIN3BO60391 1043 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 GIGYF1O75420 1035 aaPredicted RBP14.22□□□□□ -0.13
CCDC84-205ENST00000528088 MLLT3P42568 568 aaPredicted RBP14.22□□□□□ -0.13
CCDC84-205ENST00000528088 KRT24Q2M2I5 525 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 MYH16Q9H6N6 1097 aa14.22□□□□□ -0.13
CCDC84-205ENST00000528088 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms