RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
CCDC84-205ENST00000528088 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
CCDC84-205ENST00000528088 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
CCDC84-205ENST00000528088 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
CCDC84-205ENST00000528088 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
CCDC84-205ENST00000528088 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
CCDC84-205ENST00000528088 ABCC9O60706 1549 aa23.41■■□□□ 1.34
CCDC84-205ENST00000528088 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CCDC84-205ENST00000528088 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
CCDC84-205ENST00000528088 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
CCDC84-205ENST00000528088 NACADO15069 1562 aa22.19■■□□□ 1.14
CCDC84-205ENST00000528088 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
CCDC84-205ENST00000528088 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
CCDC84-205ENST00000528088 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCDC84-205ENST00000528088 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
CCDC84-205ENST00000528088 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
CCDC84-205ENST00000528088 ADRA2BP18089 450 aa21.76■■□□□ 1.07
CCDC84-205ENST00000528088 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
CCDC84-205ENST00000528088 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CCDC84-205ENST00000528088 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
CCDC84-205ENST00000528088 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.06
CCDC84-205ENST00000528088 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
CCDC84-205ENST00000528088 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
CCDC84-205ENST00000528088 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
CCDC84-205ENST00000528088 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
CCDC84-205ENST00000528088 KCNA4P22459 653 aa21.08■□□□□ 0.97
CCDC84-205ENST00000528088 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
CCDC84-205ENST00000528088 PIAS4Q8N2W9 510 aaPredicted RBP20.66■□□□□ 0.9
CCDC84-205ENST00000528088 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
CCDC84-205ENST00000528088 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
CCDC84-205ENST00000528088 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
CCDC84-205ENST00000528088 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
CCDC84-205ENST00000528088 SMARCA4P51532 1647 aa20.52■□□□□ 0.87
CCDC84-205ENST00000528088 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
CCDC84-205ENST00000528088 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
CCDC84-205ENST00000528088 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
CCDC84-205ENST00000528088 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
CCDC84-205ENST00000528088 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
CCDC84-205ENST00000528088 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
CCDC84-205ENST00000528088 NESP48681 1621 aa20.2■□□□□ 0.82
CCDC84-205ENST00000528088 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
CCDC84-205ENST00000528088 ERCC6Q03468 1493 aa20.14■□□□□ 0.82
CCDC84-205ENST00000528088 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
CCDC84-205ENST00000528088 WIZO95785 1651 aa20.12■□□□□ 0.81
CCDC84-205ENST00000528088 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
CCDC84-205ENST00000528088 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
CCDC84-205ENST00000528088 CUX2O14529 1486 aa20■□□□□ 0.79
CCDC84-205ENST00000528088 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
CCDC84-205ENST00000528088 NPM3O75607 178 aaKnown RBP19.97■□□□□ 0.79
CCDC84-205ENST00000528088 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
CCDC84-205ENST00000528088 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
CCDC84-205ENST00000528088 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
CCDC84-205ENST00000528088 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
CCDC84-205ENST00000528088 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
CCDC84-205ENST00000528088 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
CCDC84-205ENST00000528088 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
CCDC84-205ENST00000528088 CFTRP13569 1480 aa19.74■□□□□ 0.75
CCDC84-205ENST00000528088 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
CCDC84-205ENST00000528088 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
CCDC84-205ENST00000528088 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
CCDC84-205ENST00000528088 CCDC88BA6NC98 1476 aa19.68■□□□□ 0.74
CCDC84-205ENST00000528088 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
CCDC84-205ENST00000528088 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
CCDC84-205ENST00000528088 WDR62O43379 1518 aa19.64■□□□□ 0.74
CCDC84-205ENST00000528088 MSH5O43196 834 aa19.59■□□□□ 0.73
CCDC84-205ENST00000528088 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
CCDC84-205ENST00000528088 ZBTB22O15209 634 aa19.47■□□□□ 0.71
CCDC84-205ENST00000528088 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
CCDC84-205ENST00000528088 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
CCDC84-205ENST00000528088 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
CCDC84-205ENST00000528088 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
CCDC84-205ENST00000528088 IFT140Q96RY7 1462 aa19.27■□□□□ 0.68
CCDC84-205ENST00000528088 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
CCDC84-205ENST00000528088 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
CCDC84-205ENST00000528088 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
CCDC84-205ENST00000528088 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
CCDC84-205ENST00000528088 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC84-205ENST00000528088 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
CCDC84-205ENST00000528088 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
CCDC84-205ENST00000528088 CUX1P39880 1505 aa19.12■□□□□ 0.65
CCDC84-205ENST00000528088 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
CCDC84-205ENST00000528088 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
CCDC84-205ENST00000528088 SOGA1O94964 1423 aa19.1■□□□□ 0.65
CCDC84-205ENST00000528088 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
CCDC84-205ENST00000528088 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.64
CCDC84-205ENST00000528088 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
CCDC84-205ENST00000528088 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
CCDC84-205ENST00000528088 FBLN2P98095 1184 aa18.97■□□□□ 0.63
CCDC84-205ENST00000528088 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
CCDC84-205ENST00000528088 CHD1O14646 1710 aa18.92■□□□□ 0.62
CCDC84-205ENST00000528088 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
CCDC84-205ENST00000528088 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
CCDC84-205ENST00000528088 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
CCDC84-205ENST00000528088 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
CCDC84-205ENST00000528088 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
CCDC84-205ENST00000528088 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
CCDC84-205ENST00000528088 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
CCDC84-205ENST00000528088 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
CCDC84-205ENST00000528088 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
CCDC84-205ENST00000528088 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms