RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 Q3C1V9 767 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 CCDC174Q6PII3 467 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 RUNDC1Q96C34 613 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 VDRP11473 427 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 TRAPPC10P48553 1259 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 CHMP4BP1P59074 171 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 NR6A1Q15406 480 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 RGL3Q3MIN7 710 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 DUSP27Q5VZP5 1158 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 RSPH1Q8WYR4 309 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 PLIN1O60240 522 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 LMNB1P20700 586 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 SOX11P35716 441 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 EXOSC10Q01780 885 aaKnown RBP7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 PSMD2Q13200 908 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 VPS72Q15906 364 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 KSR2Q6VAB6 950 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 KIAA0907Q7Z7F0 614 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
TRAPPC11-209ENST00000512476 KIF3BO15066 747 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 ZBED6P86452 979 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 GUCA2AQ02747 115 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 PPP2R5AQ15172 486 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 E2F7Q96AV8 911 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 CEP89Q96ST8 783 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 DAAM1Q9Y4D1 1078 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 TMEM95Q3KNT9 176 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 L1TD1Q5T7N2 865 aaKnown RBP7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 SLC4A10Q6U841 1118 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 PPM1EQ8WY54 764 aa7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC11-209ENST00000512476 hCG_1984214I3L0E3 225 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 GOLIM4O00461 696 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 PIP5K1CO60331 668 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 CAND2O75155 1236 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 NOS2P35228 1153 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 ETFBP38117 255 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 ISY1Q9ULR0 285 aaKnown RBP7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 IGHA2P01877 340 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 COL6A1P12109 1028 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 ATF3P18847 181 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 RAB27AP51159 221 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 FKBP4Q02790 459 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 RBM33Q96EV2 1170 aaKnown RBP7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 CLEC11AQ9Y240 323 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 ATP8A1Q9Y2Q0 1164 aa7.82□□□□□ -1.16
TRAPPC11-209ENST00000512476 PRPF40AO75400 957 aaKnown RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 MYL1P05976 194 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 SLC4A3P48751 1232 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 CERKQ8TCT0 537 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 ERP27Q96DN0 273 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 IFT122Q9HBG6 1241 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 PCDHGC3Q9UN70 934 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 ADGRG1Q9Y653 693 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 MZF1P28698 734 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 MCL1Q07820 350 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 NEXNQ0ZGT2 675 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 NFX1Q12986 1120 aaKnown RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 PAK2Q13177 524 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 ZRSR2Q15696 482 aaKnown RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 C21orf62-AS1Q17RA5 79 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 SWI5Q1ZZU3 235 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 GRAMD1BQ3KR37 738 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 LARP1Q6PKG0 1096 aaKnown RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 CKAP2LQ8IYA6 745 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 DNAJC25Q9H1X3 360 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 CLIC5Q9NZA1 410 aa7.81□□□□□ -1.16
TRAPPC11-209ENST00000512476 NR1I2O75469 434 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 FBXO45P0C2W1 286 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 RBP3P10745 1247 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 GJA8P48165 433 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 NR1H3Q13133 447 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 SQSTM1Q13501 440 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 HDAC1Q13547 482 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 DSC3Q14574 896 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 NAA30Q147X3 362 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 MSL3Q8N5Y2 521 aaKnown RBP7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 DEPDC7Q96QD5 511 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 A6NJY4 79 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 DKK1O94907 266 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 FAM200BP0CF97 657 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 CD46P15529 392 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 EHHADHQ08426 723 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 ACBD5Q5T8D3 534 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 TTC8Q8TAM2 541 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 NELL1Q92832 810 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 CYLDQ9NQC7 956 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
TRAPPC11-209ENST00000512476 FAM83BQ5T0W9 1011 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 PDXDC1Q6P996 788 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 DNAJC7Q99615 494 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 ZIM2Q9NZV7 527 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms