RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZDHHC1Q8WTX9 485 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 TRIM11Q96F44 468 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 MDFIQ99750 246 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 PLVAPQ9BX97 442 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
CD46-218ENST00000496723 SYT9Q86SS6 491 aa8□□□□□ -1.13
CD46-218ENST00000496723 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
CD46-218ENST00000496723 SERTM1A2A2V5 107 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 USP17L5A8MUK1 530 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 LRRC69Q6ZNQ3 347 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 SLC9A9Q8IVB4 645 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 CLUAP1Q96AJ1 413 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 ZNF232Q9UNY5 417 aa7.99□□□□□ -1.13
CD46-218ENST00000496723 ATP1A2P50993 1020 aa7.98□□□□□ -1.13
CD46-218ENST00000496723 NEUROD1Q13562 356 aa7.98□□□□□ -1.13
CD46-218ENST00000496723 C1orf53Q5VUE5 145 aa7.98□□□□□ -1.13
CD46-218ENST00000496723 Q8N3U1 123 aa7.98□□□□□ -1.13
CD46-218ENST00000496723 PRDM6Q9NQX0 595 aa7.98□□□□□ -1.13
CD46-218ENST00000496723 GATA4P43694 442 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
CD46-218ENST00000496723 PRRT3Q5FWE3 981 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 TNFRSF25Q93038 417 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 ANKIB1Q9P2G1 1089 aa7.97□□□□□ -1.13
CD46-218ENST00000496723 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
CD46-218ENST00000496723 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
CD46-218ENST00000496723 M0R2N6 131 aa7.95□□□□□ -1.14
CD46-218ENST00000496723 POTEAQ6S8J7 498 aa7.95□□□□□ -1.14
CD46-218ENST00000496723 DEPDC4Q8N2C3 294 aa7.95□□□□□ -1.14
CD46-218ENST00000496723 RHPN1Q8TCX5 695 aa7.95□□□□□ -1.14
CD46-218ENST00000496723 KCNQ4P56696 695 aa7.94□□□□□ -1.14
CD46-218ENST00000496723 SFSWAPQ12872 951 aaKnown RBP7.94□□□□□ -1.14
CD46-218ENST00000496723 DOC2BQ14184 412 aa7.94□□□□□ -1.14
CD46-218ENST00000496723 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
CD46-218ENST00000496723 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
CD46-218ENST00000496723 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
CD46-218ENST00000496723 M0R082 166 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
CD46-218ENST00000496723 APBA3O96018 575 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 SPEM2Q0P670 501 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 TBCELQ5QJ74 424 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
CD46-218ENST00000496723 ZNF417Q8TAU3 575 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 ZNF587Q96SQ5 575 aaPredicted RBP7.93□□□□□ -1.14
CD46-218ENST00000496723 SLC30A3Q99726 388 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
CD46-218ENST00000496723 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 USP17L4A6NCW7 530 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
CD46-218ENST00000496723 USP17L2Q6R6M4 530 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 USP17L1Q7RTZ2 530 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 BRD7Q9NPI1 651 aa7.92□□□□□ -1.14
CD46-218ENST00000496723 A6NJR5 290 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 ITGB7P26010 798 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 ADH7P40394 386 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 CLDN10P78369 228 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 TRIM28Q13263 835 aaKnown RBP7.91□□□□□ -1.14
CD46-218ENST00000496723 COL9A3Q14050 684 aaPredicted RBP7.91□□□□□ -1.14
CD46-218ENST00000496723 SH3PXD2AQ5TCZ1 1133 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 MICALL1Q8N3F8 863 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 TSPAN10Q9H1Z9 355 aaPredicted RBP7.91□□□□□ -1.14
CD46-218ENST00000496723 STARD13Q9Y3M8 1113 aa7.91□□□□□ -1.14
CD46-218ENST00000496723 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 ATP9BO43861 1147 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 HIF1AQ16665 826 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 FNBP4Q8N3X1 1017 aaPredicted RBP7.9□□□□□ -1.14
CD46-218ENST00000496723 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 KCNH4Q9UQ05 1017 aa7.9□□□□□ -1.14
CD46-218ENST00000496723 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
CD46-218ENST00000496723 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 SIX5Q8N196 739 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 STAG2Q8N3U4 1231 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 OGFOD1Q8N543 542 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 ADAMTS19Q8TE59 1207 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 PHACTR1Q9C0D0 580 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 HCN4Q9Y3Q4 1203 aa7.89□□□□□ -1.15
CD46-218ENST00000496723 ALBP02768 609 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 TYRO3Q06418 890 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
CD46-218ENST00000496723 NKAPLQ5M9Q1 402 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 C20orf204Q6ZNR8 217 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
CD46-218ENST00000496723 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
CD46-218ENST00000496723 NID1P14543 1247 aa7.87□□□□□ -1.15
CD46-218ENST00000496723 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
CD46-218ENST00000496723 HSH2DQ96JZ2 352 aa7.87□□□□□ -1.15
CD46-218ENST00000496723 UCN2Q96RP3 112 aa7.87□□□□□ -1.15
CD46-218ENST00000496723 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
CD46-218ENST00000496723 LILRB5O75023 590 aa7.86□□□□□ -1.15
CD46-218ENST00000496723 ZNF280CQ8ND82 737 aa7.86□□□□□ -1.15
CD46-218ENST00000496723 TPSG1Q9NRR2 321 aa7.86□□□□□ -1.15
CD46-218ENST00000496723 BTLAQ7Z6A9 289 aa7.85□□□□□ -1.15
CD46-218ENST00000496723 RAB44Q7Z6P3 723 aaPredicted RBP7.85□□□□□ -1.15
CD46-218ENST00000496723 ALDH16A1Q8IZ83 802 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms