RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
CLIC4-203ENST00000489758 C4AP0C0L4 1744 aa20.58■□□□□ 0.88
CLIC4-203ENST00000489758 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 PLBD2Q8NHP8 589 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 ARXQ96QS3 562 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 ZBTB3Q9H5J0 574 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 ADCY9O60503 1353 aa20.57■□□□□ 0.88
CLIC4-203ENST00000489758 RGL2O15211 777 aa20.56■□□□□ 0.88
CLIC4-203ENST00000489758 GYS1P13807 737 aa20.56■□□□□ 0.88
CLIC4-203ENST00000489758 ANKRD13DQ6ZTN6 518 aa20.56■□□□□ 0.88
CLIC4-203ENST00000489758 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
CLIC4-203ENST00000489758 PTPRCP08575 1304 aa20.55■□□□□ 0.88
CLIC4-203ENST00000489758 MSH5O43196 834 aa20.55■□□□□ 0.88
CLIC4-203ENST00000489758 ZPR1O75312 459 aa20.55■□□□□ 0.88
CLIC4-203ENST00000489758 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
CLIC4-203ENST00000489758 HLFQ16534 295 aa20.55■□□□□ 0.88
CLIC4-203ENST00000489758 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 KIF16BQ96L93 1317 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 DDX58O95786 925 aaKnown RBP20.54■□□□□ 0.88
CLIC4-203ENST00000489758 KSR2Q6VAB6 950 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 CASZ1Q86V15 1759 aa20.54■□□□□ 0.88
CLIC4-203ENST00000489758 FKBP8Q14318 412 aa20.53■□□□□ 0.88
CLIC4-203ENST00000489758 CLEC4GQ6UXB4 293 aa20.53■□□□□ 0.88
CLIC4-203ENST00000489758 GIGYF2Q6Y7W6 1299 aaKnown RBP20.53■□□□□ 0.88
CLIC4-203ENST00000489758 BCORQ6W2J9 1755 aa20.52■□□□□ 0.88
CLIC4-203ENST00000489758 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
CLIC4-203ENST00000489758 SLC16A10Q8TF71 515 aa20.52■□□□□ 0.88
CLIC4-203ENST00000489758 ARHGAP45Q92619 1136 aa20.52■□□□□ 0.88
CLIC4-203ENST00000489758 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
CLIC4-203ENST00000489758 F6X3S4 739 aa20.51■□□□□ 0.87
CLIC4-203ENST00000489758 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
CLIC4-203ENST00000489758 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
CLIC4-203ENST00000489758 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
CLIC4-203ENST00000489758 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
CLIC4-203ENST00000489758 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
CLIC4-203ENST00000489758 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
CLIC4-203ENST00000489758 TRIM27P14373 513 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 TCIRG1Q13488 830 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 NLGN1Q8N2Q7 840 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 DNAAF4Q8WXU2 420 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 TNNQ9UQP3 1299 aa20.49■□□□□ 0.87
CLIC4-203ENST00000489758 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 TM4SF1P30408 202 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 NFIXQ14938 502 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 ISCA1Q9BUE6 129 aa20.48■□□□□ 0.87
CLIC4-203ENST00000489758 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
CLIC4-203ENST00000489758 HSP90AB3PQ58FF7 597 aa20.47■□□□□ 0.87
CLIC4-203ENST00000489758 MYD88Q99836 296 aa20.47■□□□□ 0.87
CLIC4-203ENST00000489758 MTFR1LQ9H019 292 aa20.47■□□□□ 0.87
CLIC4-203ENST00000489758 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
CLIC4-203ENST00000489758 IGKV5-2P06315 115 aa20.46■□□□□ 0.87
CLIC4-203ENST00000489758 BEND3Q5T5X7 828 aa20.46■□□□□ 0.87
CLIC4-203ENST00000489758 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLIC4-203ENST00000489758 ABCC4O15439 1325 aa20.46■□□□□ 0.87
CLIC4-203ENST00000489758 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
CLIC4-203ENST00000489758 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 PLIN1O60240 522 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 GPTP24298 496 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 DDR1Q08345 913 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.86
CLIC4-203ENST00000489758 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
CLIC4-203ENST00000489758 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
CLIC4-203ENST00000489758 NLRP10Q86W26 655 aa20.44■□□□□ 0.86
CLIC4-203ENST00000489758 LINS1Q8NG48 757 aa20.44■□□□□ 0.86
CLIC4-203ENST00000489758 SPON1Q9HCB6 807 aa20.44■□□□□ 0.86
CLIC4-203ENST00000489758 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
CLIC4-203ENST00000489758 CACNA1FO60840 1977 aa20.44■□□□□ 0.86
CLIC4-203ENST00000489758 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
CLIC4-203ENST00000489758 MMP10P09238 476 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 RRP1P56182 461 aaKnown RBP20.43■□□□□ 0.86
CLIC4-203ENST00000489758 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 CWF19L2Q2TBE0 894 aaKnown RBP20.43■□□□□ 0.86
CLIC4-203ENST00000489758 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 SETDB2Q96T68 719 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 SGIP1Q9BQI5 828 aa20.43■□□□□ 0.86
CLIC4-203ENST00000489758 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
CLIC4-203ENST00000489758 RLBP1P12271 317 aa20.42■□□□□ 0.86
CLIC4-203ENST00000489758 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
CLIC4-203ENST00000489758 SUSD4Q5VX71 490 aa20.42■□□□□ 0.86
CLIC4-203ENST00000489758 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
CLIC4-203ENST00000489758 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
CLIC4-203ENST00000489758 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
CLIC4-203ENST00000489758 PTGER2P43116 358 aa20.41■□□□□ 0.86
CLIC4-203ENST00000489758 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
CLIC4-203ENST00000489758 DZIP1LQ8IYY4 767 aaKnown RBP20.41■□□□□ 0.86
CLIC4-203ENST00000489758 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
CLIC4-203ENST00000489758 NTSR2O95665 410 aa20.4■□□□□ 0.86
CLIC4-203ENST00000489758 CCT4P50991 539 aaKnown RBP20.4■□□□□ 0.86
CLIC4-203ENST00000489758 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.4■□□□□ 0.86
CLIC4-203ENST00000489758 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
CLIC4-203ENST00000489758 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms