RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PROSER3Q2NL68 480 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 EVI5LQ96CN4 794 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 PANK2Q9BZ23 570 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-216ENST00000486741 RBM25P49756 843 aaKnown RBP15.76■□□□□ 0.11
HMGN1-216ENST00000486741 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
HMGN1-216ENST00000486741 PTPRMP28827 1452 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-216ENST00000486741 SNX21Q969T3 373 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 NEXMIFQ5QGS0 1516 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 EXOC5O00471 708 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 ACSBG1Q96GR2 724 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 POLR1AO95602 1720 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-216ENST00000486741 GOLGA6L19H0YKK7 550 aa15.75■□□□□ 0.11
HMGN1-216ENST00000486741 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
HMGN1-216ENST00000486741 IFIT5Q13325 482 aaKnown RBP15.75■□□□□ 0.11
HMGN1-216ENST00000486741 A1BGP04217 495 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 PDCP20941 246 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 LAMC1P11047 1609 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 G3V3G9 751 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 DCAF8Q5TAQ9 597 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
HMGN1-216ENST00000486741 HAND2P61296 217 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 TRIM29Q14134 588 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 DCAF5Q96JK2 942 aa15.74■□□□□ 0.11
HMGN1-216ENST00000486741 GUCY1B3Q02153 619 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 RAB11FIP4Q86YS3 637 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 RASSF8Q8NHQ8 419 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 SETBP1Q9Y6X0 1596 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-216ENST00000486741 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-216ENST00000486741 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 NRDCO43847 1150 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 LDHAL6AQ6ZMR3 332 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 SUCLG2Q96I99 432 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
HMGN1-216ENST00000486741 TSPY26PQ9H489 355 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
HMGN1-216ENST00000486741 PNPLA6Q8IY17 1366 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 CCT2P78371 535 aaKnown RBP15.72■□□□□ 0.11
HMGN1-216ENST00000486741 SASS6Q6UVJ0 657 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 CCDC73Q6ZRK6 1079 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 RBM8AQ9Y5S9 174 aaKnown RBP15.72■□□□□ 0.11
HMGN1-216ENST00000486741 IQGAP1P46940 1657 aa15.72■□□□□ 0.11
HMGN1-216ENST00000486741 TFCP2Q12800 502 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 ADGRB1O14514 1584 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 CD2BP2O95400 341 aaKnown RBP15.71■□□□□ 0.11
HMGN1-216ENST00000486741 IL2RBP14784 551 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-216ENST00000486741 ANKRD1Q15327 319 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 ARHGEF25Q86VW2 580 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 PODXL2Q9NZ53 605 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 TIMM10P62072 90 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 CAMK4Q16566 473 aa15.71■□□□□ 0.11
HMGN1-216ENST00000486741 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-216ENST00000486741 RAD21O60216 631 aa15.71■□□□□ 0.1
HMGN1-216ENST00000486741 KRT85P78386 507 aa15.71■□□□□ 0.1
HMGN1-216ENST00000486741 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.1
HMGN1-216ENST00000486741 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.1
HMGN1-216ENST00000486741 ZSCAN31Q96LW9 406 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-216ENST00000486741 ERICH2A1L162 156 aa15.7■□□□□ 0.1
HMGN1-216ENST00000486741 GJB2P29033 226 aa15.7■□□□□ 0.1
HMGN1-216ENST00000486741 HSP90AB3PQ58FF7 597 aa15.7■□□□□ 0.1
HMGN1-216ENST00000486741 PIK3C2BO00750 1634 aa15.7■□□□□ 0.1
HMGN1-216ENST00000486741 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGN1-216ENST00000486741 UNC5CLQ8IV45 518 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 CHAMP1Q96JM3 812 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 BTG4Q9NY30 223 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 SPC24Q8NBT2 197 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 FRMPD1Q5SYB0 1578 aa15.69■□□□□ 0.1
HMGN1-216ENST00000486741 XRCC6P12956 609 aaKnown RBP eCLIP15.69■□□□□ 0.1
HMGN1-216ENST00000486741 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-216ENST00000486741 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-216ENST00000486741 FAM89AQ96GI7 184 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 MROH2AA6NES4 1674 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 SPATA32Q96LK8 384 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 LRRC7Q96NW7 1537 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 CCDC82Q8N4S0 544 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-216ENST00000486741 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 ME1P48163 572 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 AK2P54819 239 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 KRT32Q14532 448 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 TMX4Q9H1E5 349 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-216ENST00000486741 LRP2BPQ9P2M1 347 aa15.68■□□□□ 0.1
HMGN1-216ENST00000486741 IQSEC3Q9UPP2 1182 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-216ENST00000486741 CLTCQ00610 1675 aaKnown RBP15.67■□□□□ 0.1
HMGN1-216ENST00000486741 STX6O43752 255 aa15.67■□□□□ 0.1
HMGN1-216ENST00000486741 BEND3Q5T5X7 828 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms