RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 MRPL50Q8N5N7 158 aaKnown RBP16.93■□□□□ 0.3
HDAC1-208ENST00000482310 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
HDAC1-208ENST00000482310 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
HDAC1-208ENST00000482310 A0A087WZG4 1122 aa16.92■□□□□ 0.3
HDAC1-208ENST00000482310 ZPR1O75312 459 aa16.92■□□□□ 0.3
HDAC1-208ENST00000482310 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
HDAC1-208ENST00000482310 ADRA2BP18089 450 aa16.91■□□□□ 0.3
HDAC1-208ENST00000482310 YY1P25490 414 aa16.91■□□□□ 0.3
HDAC1-208ENST00000482310 FLIIQ13045 1269 aa16.91■□□□□ 0.3
HDAC1-208ENST00000482310 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
HDAC1-208ENST00000482310 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
HDAC1-208ENST00000482310 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
HDAC1-208ENST00000482310 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
HDAC1-208ENST00000482310 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
HDAC1-208ENST00000482310 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
HDAC1-208ENST00000482310 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
HDAC1-208ENST00000482310 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
HDAC1-208ENST00000482310 FLAD1Q8NFF5 587 aa16.9■□□□□ 0.3
HDAC1-208ENST00000482310 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
HDAC1-208ENST00000482310 CAMTA2O94983 1202 aa16.89■□□□□ 0.29
HDAC1-208ENST00000482310 HLFQ16534 295 aa16.89■□□□□ 0.29
HDAC1-208ENST00000482310 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
HDAC1-208ENST00000482310 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
HDAC1-208ENST00000482310 PTGER2P43116 358 aa16.88■□□□□ 0.29
HDAC1-208ENST00000482310 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
HDAC1-208ENST00000482310 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 F6X3S4 739 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
HDAC1-208ENST00000482310 GYS1P13807 737 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 FKBP8Q14318 412 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 PPP1R1BQ9UD71 204 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-208ENST00000482310 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-208ENST00000482310 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 ADCY9O60503 1353 aa16.87■□□□□ 0.29
HDAC1-208ENST00000482310 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 GPTP24298 496 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 PLBD2Q8NHP8 589 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
HDAC1-208ENST00000482310 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
HDAC1-208ENST00000482310 PLIN1O60240 522 aa16.85■□□□□ 0.29
HDAC1-208ENST00000482310 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
HDAC1-208ENST00000482310 MYD88Q99836 296 aa16.85■□□□□ 0.29
HDAC1-208ENST00000482310 ZNF652Q9Y2D9 606 aa16.85■□□□□ 0.29
HDAC1-208ENST00000482310 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
HDAC1-208ENST00000482310 PTPRCP08575 1304 aa16.83■□□□□ 0.28
HDAC1-208ENST00000482310 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
HDAC1-208ENST00000482310 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
HDAC1-208ENST00000482310 SGIP1Q9BQI5 828 aa16.83■□□□□ 0.28
HDAC1-208ENST00000482310 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC1-208ENST00000482310 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
HDAC1-208ENST00000482310 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
HDAC1-208ENST00000482310 NFIXQ14938 502 aa16.82■□□□□ 0.28
HDAC1-208ENST00000482310 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
HDAC1-208ENST00000482310 MYH3P11055 1940 aa16.82■□□□□ 0.28
HDAC1-208ENST00000482310 LAMB2P55268 1798 aa16.82■□□□□ 0.28
HDAC1-208ENST00000482310 UBN2Q6ZU65 1347 aa16.81■□□□□ 0.28
HDAC1-208ENST00000482310 NPHP1O15259 732 aa16.81■□□□□ 0.28
HDAC1-208ENST00000482310 MMP10P09238 476 aa16.81■□□□□ 0.28
HDAC1-208ENST00000482310 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
HDAC1-208ENST00000482310 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
HDAC1-208ENST00000482310 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
HDAC1-208ENST00000482310 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 TRIM27P14373 513 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 DDR1Q08345 913 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
HDAC1-208ENST00000482310 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 CCDC24Q8N4L8 307 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
HDAC1-208ENST00000482310 UTRNP46939 3433 aa16.8■□□□□ 0.28
HDAC1-208ENST00000482310 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
HDAC1-208ENST00000482310 BRPF1P55201 1214 aaPredicted RBP16.79■□□□□ 0.28
HDAC1-208ENST00000482310 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
HDAC1-208ENST00000482310 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 ATF7IPQ6VMQ6 1270 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
HDAC1-208ENST00000482310 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 API5Q9BZZ5 524 aaKnown RBP16.79■□□□□ 0.28
HDAC1-208ENST00000482310 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
HDAC1-208ENST00000482310 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
HDAC1-208ENST00000482310 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
HDAC1-208ENST00000482310 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-208ENST00000482310 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-208ENST00000482310 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-208ENST00000482310 PXDNLA1KZ92 1463 aa16.78■□□□□ 0.28
HDAC1-208ENST00000482310 SPEF2Q9C093 1822 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 POLD1P28340 1107 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms