RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
CMC1-209ENST00000477739 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 KIF24Q5T7B8 1368 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 MBD3O95983 291 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 CHAF1AQ13111 956 aaPredicted RBP11.68□□□□□ -0.54
CMC1-209ENST00000477739 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
CMC1-209ENST00000477739 RAB11FIP3O75154 756 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 TPM2P07951 284 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 ADCK5Q3MIX3 580 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
CMC1-209ENST00000477739 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
CMC1-209ENST00000477739 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
CMC1-209ENST00000477739 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 HSP90AB3PQ58FF7 597 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 ZKSCAN5Q9Y2L8 839 aa11.68□□□□□ -0.54
CMC1-209ENST00000477739 SYT1P21579 422 aa11.67□□□□□ -0.54
CMC1-209ENST00000477739 STX6O43752 255 aa11.67□□□□□ -0.54
CMC1-209ENST00000477739 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
CMC1-209ENST00000477739 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
CMC1-209ENST00000477739 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
CMC1-209ENST00000477739 CRB1P82279 1406 aa11.67□□□□□ -0.54
CMC1-209ENST00000477739 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
CMC1-209ENST00000477739 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
CMC1-209ENST00000477739 ATP8B2P98198 1209 aa11.67□□□□□ -0.54
CMC1-209ENST00000477739 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
CMC1-209ENST00000477739 NRXN3Q9Y4C0 1643 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 OFD1O75665 1012 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 PHF14O94880 888 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 PTH1RQ03431 593 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
CMC1-209ENST00000477739 GORABQ5T7V8 394 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 TMX1Q9H3N1 280 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
CMC1-209ENST00000477739 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
CMC1-209ENST00000477739 IP6K1Q92551 441 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 USP44Q9H0E7 712 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
CMC1-209ENST00000477739 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 DNAAF4Q8WXU2 420 aa11.65□□□□□ -0.54
CMC1-209ENST00000477739 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
CMC1-209ENST00000477739 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 DDIT3P35638 169 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 LRMPQ12912 555 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 PTPN21Q16825 1174 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 ITSN1Q15811 1721 aa11.64□□□□□ -0.55
CMC1-209ENST00000477739 BIN1O00499 593 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 ATP2B1P20020 1258 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 PTGS1P23219 599 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
CMC1-209ENST00000477739 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 GCP02774 474 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 BECN2A8MW95 431 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
CMC1-209ENST00000477739 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
CMC1-209ENST00000477739 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
CMC1-209ENST00000477739 ZNF445P59923 1031 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 HAND2P61296 217 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CMC1-209ENST00000477739 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
CMC1-209ENST00000477739 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 JAK2O60674 1132 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 ZSCAN22P10073 491 aaPredicted RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 NAA30Q147X3 362 aaPredicted RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms