RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 CCDC125Q86Z20 511 aa15.08■□□□□ 0
RNF13-208ENST00000467996 CLUAP1Q96AJ1 413 aa15.08■□□□□ 0
RNF13-208ENST00000467996 RLBP1P12271 317 aa15.07■□□□□ 0
RNF13-208ENST00000467996 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
RNF13-208ENST00000467996 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
RNF13-208ENST00000467996 PDE3AQ14432 1141 aa15.07■□□□□ 0
RNF13-208ENST00000467996 DEFB132Q7Z7B7 95 aa15.07■□□□□ 0
RNF13-208ENST00000467996 FTSJ3Q8IY81 847 aaKnown RBP15.07■□□□□ 0
RNF13-208ENST00000467996 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
RNF13-208ENST00000467996 AK7Q96M32 723 aa15.07■□□□□ 0
RNF13-208ENST00000467996 F6X3S4 739 aa15.06■□□□□ 0
RNF13-208ENST00000467996 GNPATO15228 680 aa15.06■□□□□ 0
RNF13-208ENST00000467996 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
RNF13-208ENST00000467996 MS4A1P11836 297 aa15.06■□□□□ 0
RNF13-208ENST00000467996 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
RNF13-208ENST00000467996 PANK1Q8TE04 598 aa15.06■□□□□ 0
RNF13-208ENST00000467996 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
RNF13-208ENST00000467996 RPS6KA4O75676 772 aa15.05■□□□□ -0
RNF13-208ENST00000467996 NEFLP07196 543 aa15.05■□□□□ -0
RNF13-208ENST00000467996 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
RNF13-208ENST00000467996 KSR2Q6VAB6 950 aa15.05■□□□□ -0
RNF13-208ENST00000467996 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
RNF13-208ENST00000467996 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
RNF13-208ENST00000467996 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
RNF13-208ENST00000467996 ATP10DQ9P241 1426 aa15.05■□□□□ -0
RNF13-208ENST00000467996 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
RNF13-208ENST00000467996 ZNF827Q17R98 1081 aa15.04■□□□□ -0
RNF13-208ENST00000467996 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
RNF13-208ENST00000467996 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
RNF13-208ENST00000467996 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
RNF13-208ENST00000467996 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
RNF13-208ENST00000467996 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
RNF13-208ENST00000467996 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
RNF13-208ENST00000467996 PLBD2Q8NHP8 589 aa15.04■□□□□ -0
RNF13-208ENST00000467996 DNAAF4Q8WXU2 420 aa15.04■□□□□ -0
RNF13-208ENST00000467996 UPF1Q92900 1129 aaKnown RBP eCLIP15.04■□□□□ -0
RNF13-208ENST00000467996 ZBTB3Q9H5J0 574 aa15.04■□□□□ -0
RNF13-208ENST00000467996 RTCBQ9Y3I0 505 aaKnown RBP15.04■□□□□ -0
RNF13-208ENST00000467996 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
RNF13-208ENST00000467996 SMIM5Q71RC9 77 aa15.03■□□□□ -0
RNF13-208ENST00000467996 AKT1S1Q96B36 256 aa15.03■□□□□ -0
RNF13-208ENST00000467996 CRBNQ96SW2 442 aa15.03■□□□□ -0
RNF13-208ENST00000467996 COG6Q9Y2V7 657 aa15.03■□□□□ -0
RNF13-208ENST00000467996 A0A087WZG4 1122 aa15.02■□□□□ -0
RNF13-208ENST00000467996 PHF14O94880 888 aa15.02■□□□□ -0
RNF13-208ENST00000467996 MVPQ14764 893 aaKnown RBP15.02■□□□□ -0
RNF13-208ENST00000467996 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
RNF13-208ENST00000467996 COL24A1Q17RW2 1714 aa15.02□□□□□ -0.01
RNF13-208ENST00000467996 SSFA2P28290 1259 aa15.01□□□□□ -0.01
RNF13-208ENST00000467996 CCT4P50991 539 aaKnown RBP15.01□□□□□ -0.01
RNF13-208ENST00000467996 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
RNF13-208ENST00000467996 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
RNF13-208ENST00000467996 ARXQ96QS3 562 aa15.01□□□□□ -0.01
RNF13-208ENST00000467996 METTL22Q9BUU2 404 aaPredicted RBP15.01□□□□□ -0.01
RNF13-208ENST00000467996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
RNF13-208ENST00000467996 ERVV-1B6SEH8 477 aa15□□□□□ -0.01
RNF13-208ENST00000467996 CAMTA2O94983 1202 aa15□□□□□ -0.01
RNF13-208ENST00000467996 BEND3Q5T5X7 828 aa15□□□□□ -0.01
RNF13-208ENST00000467996 MYD88Q99836 296 aa15□□□□□ -0.01
RNF13-208ENST00000467996 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
RNF13-208ENST00000467996 NEXNQ0ZGT2 675 aa14.99□□□□□ -0.01
RNF13-208ENST00000467996 FKBP8Q14318 412 aa14.99□□□□□ -0.01
RNF13-208ENST00000467996 HLFQ16534 295 aa14.99□□□□□ -0.01
RNF13-208ENST00000467996 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
RNF13-208ENST00000467996 EXOC6Q8TAG9 804 aa14.99□□□□□ -0.01
RNF13-208ENST00000467996 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
RNF13-208ENST00000467996 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
RNF13-208ENST00000467996 USP42Q9H9J4 1324 aaKnown RBP14.98□□□□□ -0.01
RNF13-208ENST00000467996 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 LINS1Q8NG48 757 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 NARFQ9UHQ1 456 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 LAMB2P55268 1798 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
RNF13-208ENST00000467996 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
RNF13-208ENST00000467996 ALDH1L1O75891 902 aa14.97□□□□□ -0.01
RNF13-208ENST00000467996 RFC4P35249 363 aa14.97□□□□□ -0.01
RNF13-208ENST00000467996 SLC15A2Q16348 729 aa14.97□□□□□ -0.01
RNF13-208ENST00000467996 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
RNF13-208ENST00000467996 USPL1Q5W0Q7 1092 aa14.97□□□□□ -0.01
RNF13-208ENST00000467996 SRP68Q9UHB9 627 aaKnown RBP14.97□□□□□ -0.01
RNF13-208ENST00000467996 PNPLA7Q6ZV29 1317 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 RGL2O15211 777 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 ZPR1O75312 459 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 TCIRG1Q13488 830 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 BCL2L12Q9HB09 334 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
RNF13-208ENST00000467996 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
RNF13-208ENST00000467996 MYH3P11055 1940 aa14.94□□□□□ -0.02
RNF13-208ENST00000467996 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
RNF13-208ENST00000467996 GPTP24298 496 aa14.94□□□□□ -0.02
RNF13-208ENST00000467996 CLEC4GQ6UXB4 293 aa14.94□□□□□ -0.02
RNF13-208ENST00000467996 COL23A1Q86Y22 540 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms