RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 UBR2Q8IWV8 1755 aa12.9□□□□□ -0.34
VPS45-204ENST00000460366 HOXB7P09629 217 aa12.9□□□□□ -0.34
VPS45-204ENST00000460366 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
VPS45-204ENST00000460366 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
VPS45-204ENST00000460366 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
VPS45-204ENST00000460366 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
VPS45-204ENST00000460366 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
VPS45-204ENST00000460366 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
VPS45-204ENST00000460366 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
VPS45-204ENST00000460366 ZNF827Q17R98 1081 aa12.89□□□□□ -0.35
VPS45-204ENST00000460366 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
VPS45-204ENST00000460366 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
VPS45-204ENST00000460366 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 AK7Q96M32 723 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
VPS45-204ENST00000460366 C5P01031 1676 aa12.87□□□□□ -0.35
VPS45-204ENST00000460366 E9PSI1 815 aa12.87□□□□□ -0.35
VPS45-204ENST00000460366 SSFA2P28290 1259 aa12.87□□□□□ -0.35
VPS45-204ENST00000460366 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
VPS45-204ENST00000460366 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
VPS45-204ENST00000460366 GNPATO15228 680 aa12.86□□□□□ -0.35
VPS45-204ENST00000460366 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS45-204ENST00000460366 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
VPS45-204ENST00000460366 ERBB4Q15303 1308 aa12.86□□□□□ -0.35
VPS45-204ENST00000460366 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 R3HDM1Q15032 1099 aaKnown RBP12.85□□□□□ -0.35
VPS45-204ENST00000460366 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
VPS45-204ENST00000460366 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 FANCIQ9NVI1 1328 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 TJP1Q07157 1748 aa12.85□□□□□ -0.35
VPS45-204ENST00000460366 A1BGP04217 495 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
VPS45-204ENST00000460366 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
VPS45-204ENST00000460366 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
VPS45-204ENST00000460366 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
VPS45-204ENST00000460366 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
VPS45-204ENST00000460366 A0A087WZG4 1122 aa12.83□□□□□ -0.36
VPS45-204ENST00000460366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
VPS45-204ENST00000460366 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
VPS45-204ENST00000460366 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
VPS45-204ENST00000460366 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
VPS45-204ENST00000460366 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
VPS45-204ENST00000460366 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
VPS45-204ENST00000460366 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
VPS45-204ENST00000460366 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
VPS45-204ENST00000460366 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS45-204ENST00000460366 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
VPS45-204ENST00000460366 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
VPS45-204ENST00000460366 VAMP4O75379 141 aa12.8□□□□□ -0.36
VPS45-204ENST00000460366 RFC4P35249 363 aa12.8□□□□□ -0.36
VPS45-204ENST00000460366 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
VPS45-204ENST00000460366 PDIA6Q15084 440 aa12.8□□□□□ -0.36
VPS45-204ENST00000460366 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
VPS45-204ENST00000460366 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
VPS45-204ENST00000460366 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 PHF14O94880 888 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
VPS45-204ENST00000460366 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 MTFR1LQ9H019 292 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 COL15A1P39059 1388 aa12.79□□□□□ -0.36
VPS45-204ENST00000460366 ZPR1O75312 459 aa12.78□□□□□ -0.36
VPS45-204ENST00000460366 SMIM5Q71RC9 77 aa12.78□□□□□ -0.36
VPS45-204ENST00000460366 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
VPS45-204ENST00000460366 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
VPS45-204ENST00000460366 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
VPS45-204ENST00000460366 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
VPS45-204ENST00000460366 LAMB4A4D0S4 1761 aa12.77□□□□□ -0.36
VPS45-204ENST00000460366 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
VPS45-204ENST00000460366 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
VPS45-204ENST00000460366 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
VPS45-204ENST00000460366 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 STK25O00506 426 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
VPS45-204ENST00000460366 CLEC4GQ6UXB4 293 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms