RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 SCN4AP35499 1836 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
SRRT-206ENST00000460194 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
SRRT-206ENST00000460194 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
SRRT-206ENST00000460194 DZIP3Q86Y13 1208 aaKnown RBP17.75■□□□□ 0.43
SRRT-206ENST00000460194 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
SRRT-206ENST00000460194 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
SRRT-206ENST00000460194 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
SRRT-206ENST00000460194 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
SRRT-206ENST00000460194 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
SRRT-206ENST00000460194 RGL2O15211 777 aa17.73■□□□□ 0.43
SRRT-206ENST00000460194 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
SRRT-206ENST00000460194 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
SRRT-206ENST00000460194 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
SRRT-206ENST00000460194 LAMB4A4D0S4 1761 aa17.73■□□□□ 0.43
SRRT-206ENST00000460194 ADAMTSL1Q8N6G6 1762 aa17.72■□□□□ 0.43
SRRT-206ENST00000460194 DDNO94850 711 aaPredicted RBP17.72■□□□□ 0.43
SRRT-206ENST00000460194 MCM10Q7L590 875 aa17.72■□□□□ 0.43
SRRT-206ENST00000460194 NUP98P52948 1817 aa17.72■□□□□ 0.43
SRRT-206ENST00000460194 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
SRRT-206ENST00000460194 SNRPA1P09661 255 aaKnown RBP17.71■□□□□ 0.43
SRRT-206ENST00000460194 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
SRRT-206ENST00000460194 CNGB1Q14028 1251 aaPredicted RBP17.71■□□□□ 0.43
SRRT-206ENST00000460194 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.43
SRRT-206ENST00000460194 ST5P78524 1137 aa17.7■□□□□ 0.42
SRRT-206ENST00000460194 CHADLQ6NUI6 762 aa17.7■□□□□ 0.42
SRRT-206ENST00000460194 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
SRRT-206ENST00000460194 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
SRRT-206ENST00000460194 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
SRRT-206ENST00000460194 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
SRRT-206ENST00000460194 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
SRRT-206ENST00000460194 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
SRRT-206ENST00000460194 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
SRRT-206ENST00000460194 NPR1P16066 1061 aa17.68■□□□□ 0.42
SRRT-206ENST00000460194 HLFQ16534 295 aa17.68■□□□□ 0.42
SRRT-206ENST00000460194 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
SRRT-206ENST00000460194 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
SRRT-206ENST00000460194 CREBZFQ9NS37 354 aa17.68■□□□□ 0.42
SRRT-206ENST00000460194 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
SRRT-206ENST00000460194 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
SRRT-206ENST00000460194 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
SRRT-206ENST00000460194 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
SRRT-206ENST00000460194 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
SRRT-206ENST00000460194 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
SRRT-206ENST00000460194 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
SRRT-206ENST00000460194 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
SRRT-206ENST00000460194 CCDC93Q567U6 631 aa17.65■□□□□ 0.42
SRRT-206ENST00000460194 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
SRRT-206ENST00000460194 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
SRRT-206ENST00000460194 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
SRRT-206ENST00000460194 ZNF652Q9Y2D9 606 aa17.65■□□□□ 0.42
SRRT-206ENST00000460194 ZNF541Q9H0D2 1346 aa17.65■□□□□ 0.42
SRRT-206ENST00000460194 COL4A5P29400 1685 aa17.64■□□□□ 0.42
SRRT-206ENST00000460194 CRY2Q49AN0 593 aa17.64■□□□□ 0.41
SRRT-206ENST00000460194 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
SRRT-206ENST00000460194 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
SRRT-206ENST00000460194 FZD9O00144 591 aa17.63■□□□□ 0.41
SRRT-206ENST00000460194 ZNF277Q9NRM2 450 aaPredicted RBP17.63■□□□□ 0.41
SRRT-206ENST00000460194 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
SRRT-206ENST00000460194 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 NPHP1O15259 732 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 LDHDQ86WU2 507 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
SRRT-206ENST00000460194 LTBP1Q14766 1721 aa17.61■□□□□ 0.41
SRRT-206ENST00000460194 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
SRRT-206ENST00000460194 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
SRRT-206ENST00000460194 ERVV-1B6SEH8 477 aa17.6■□□□□ 0.41
SRRT-206ENST00000460194 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
SRRT-206ENST00000460194 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
SRRT-206ENST00000460194 IARSP41252 1262 aaKnown RBP17.59■□□□□ 0.41
SRRT-206ENST00000460194 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
SRRT-206ENST00000460194 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
SRRT-206ENST00000460194 PSMD1Q99460 953 aa17.59■□□□□ 0.41
SRRT-206ENST00000460194 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
SRRT-206ENST00000460194 UBN2Q6ZU65 1347 aa17.58■□□□□ 0.4
SRRT-206ENST00000460194 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
SRRT-206ENST00000460194 HOXA10P31260 410 aaPredicted RBP17.58■□□□□ 0.4
SRRT-206ENST00000460194 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
SRRT-206ENST00000460194 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
SRRT-206ENST00000460194 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
SRRT-206ENST00000460194 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
SRRT-206ENST00000460194 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
SRRT-206ENST00000460194 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
SRRT-206ENST00000460194 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 FOXN1O15353 648 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 EPHX2P34913 555 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 ZNF34Q8IZ26 560 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 GPC2Q8N158 579 aa17.56■□□□□ 0.4
SRRT-206ENST00000460194 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
SRRT-206ENST00000460194 VEGFBP49765 207 aa17.55■□□□□ 0.4
SRRT-206ENST00000460194 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
SRRT-206ENST00000460194 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
SRRT-206ENST00000460194 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms