RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 JMYQ8N9B5 988 aa24.84■■□□□ 1.57
HDAC11-216ENST00000458642 DICER1Q9UPY3 1922 aaKnown RBP24.82■■□□□ 1.56
HDAC11-216ENST00000458642 NPHP1O15259 732 aa24.81■■□□□ 1.56
HDAC11-216ENST00000458642 SRGNP10124 158 aa24.81■■□□□ 1.56
HDAC11-216ENST00000458642 ERFEQ4G0M1 354 aa24.81■■□□□ 1.56
HDAC11-216ENST00000458642 PRPF40BQ6NWY9 871 aaKnown RBP24.81■■□□□ 1.56
HDAC11-216ENST00000458642 NPM2Q86SE8 214 aaKnown RBP24.81■■□□□ 1.56
HDAC11-216ENST00000458642 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
HDAC11-216ENST00000458642 NBPF26B4DH59 902 aa24.8■■□□□ 1.56
HDAC11-216ENST00000458642 NBPF10Q6P3W6 841 aaKnown RBP24.8■■□□□ 1.56
HDAC11-216ENST00000458642 NBPF15Q8N660 670 aa24.8■■□□□ 1.56
HDAC11-216ENST00000458642 ST5P78524 1137 aa24.79■■□□□ 1.56
HDAC11-216ENST00000458642 PDZRN3Q9UPQ7 1066 aa24.79■■□□□ 1.56
HDAC11-216ENST00000458642 NUDCQ9Y266 331 aa24.79■■□□□ 1.56
HDAC11-216ENST00000458642 SNRPA1P09661 255 aaKnown RBP24.78■■□□□ 1.56
HDAC11-216ENST00000458642 COL13A1Q5TAT6 717 aaPredicted RBP24.78■■□□□ 1.56
HDAC11-216ENST00000458642 STYK1Q6J9G0 422 aa24.78■■□□□ 1.56
HDAC11-216ENST00000458642 RTF1Q92541 710 aaKnown RBP24.78■■□□□ 1.56
HDAC11-216ENST00000458642 TAOK3Q9H2K8 898 aa24.78■■□□□ 1.56
HDAC11-216ENST00000458642 MIS18AQ9NYP9 233 aa24.77■■□□□ 1.56
HDAC11-216ENST00000458642 POTEIP0CG38 1075 aa24.76■■□□□ 1.55
HDAC11-216ENST00000458642 POTEJP0CG39 1038 aa24.76■■□□□ 1.55
HDAC11-216ENST00000458642 NBPF5PQ86XG9 351 aaPredicted RBP24.76■■□□□ 1.55
HDAC11-216ENST00000458642 CNKSR1Q969H4 720 aa24.76■■□□□ 1.55
HDAC11-216ENST00000458642 MASTLQ96GX5 879 aa24.76■■□□□ 1.55
HDAC11-216ENST00000458642 LTBP3Q9NS15 1303 aa24.76■■□□□ 1.55
HDAC11-216ENST00000458642 FAM177BA6PVY3 158 aa24.75■■□□□ 1.55
HDAC11-216ENST00000458642 DDNO94850 711 aaPredicted RBP24.75■■□□□ 1.55
HDAC11-216ENST00000458642 DPY19L2Q6NUT2 758 aa24.75■■□□□ 1.55
HDAC11-216ENST00000458642 OLFM4Q6UX06 510 aa24.75■■□□□ 1.55
HDAC11-216ENST00000458642 HLFQ16534 295 aa24.73■■□□□ 1.55
HDAC11-216ENST00000458642 CLEC4GQ6UXB4 293 aa24.73■■□□□ 1.55
HDAC11-216ENST00000458642 C7orf43Q8WVR3 580 aa24.73■■□□□ 1.55
HDAC11-216ENST00000458642 NIP7Q9Y221 180 aaKnown RBP eCLIP24.72■■□□□ 1.55
HDAC11-216ENST00000458642 DLG5Q8TDM6 1919 aa24.72■■□□□ 1.55
HDAC11-216ENST00000458642 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
HDAC11-216ENST00000458642 ZNF652Q9Y2D9 606 aa24.71■■□□□ 1.55
HDAC11-216ENST00000458642 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.54
HDAC11-216ENST00000458642 HTATSF1O43719 755 aaKnown RBP24.69■■□□□ 1.54
HDAC11-216ENST00000458642 TAF7Q15545 349 aaPredicted RBP24.69■■□□□ 1.54
HDAC11-216ENST00000458642 KLRG2A4D1S0 409 aaPredicted RBP24.68■■□□□ 1.54
HDAC11-216ENST00000458642 NPR1P16066 1061 aa24.68■■□□□ 1.54
HDAC11-216ENST00000458642 NGEFQ8N5V2 710 aa24.68■■□□□ 1.54
HDAC11-216ENST00000458642 THUMPD2Q9BTF0 503 aaKnown RBP24.68■■□□□ 1.54
HDAC11-216ENST00000458642 ZNF277Q9NRM2 450 aaPredicted RBP24.68■■□□□ 1.54
HDAC11-216ENST00000458642 CCDC93Q567U6 631 aa24.67■■□□□ 1.54
HDAC11-216ENST00000458642 SOGA3Q5TF21 947 aa24.67■■□□□ 1.54
HDAC11-216ENST00000458642 ZNF541Q9H0D2 1346 aa24.66■■□□□ 1.54
HDAC11-216ENST00000458642 HSPA1AP0DMV8 641 aaKnown RBP24.66■■□□□ 1.54
HDAC11-216ENST00000458642 HSPA1BP0DMV9 641 aaKnown RBP24.66■■□□□ 1.54
HDAC11-216ENST00000458642 CHADLQ6NUI6 762 aa24.66■■□□□ 1.54
HDAC11-216ENST00000458642 TPTE2Q6XPS3 522 aa24.66■■□□□ 1.54
HDAC11-216ENST00000458642 ABCC12Q96J65 1359 aa24.66■■□□□ 1.54
HDAC11-216ENST00000458642 SLC51AQ86UW1 340 aa24.64■■□□□ 1.54
HDAC11-216ENST00000458642 NUTM1Q86Y26 1132 aa24.64■■□□□ 1.54
HDAC11-216ENST00000458642 FKBP4Q02790 459 aaKnown RBP eCLIP24.63■■□□□ 1.53
HDAC11-216ENST00000458642 TTLL7Q6ZT98 887 aa24.63■■□□□ 1.53
HDAC11-216ENST00000458642 PLEKHF1Q96S99 279 aa24.63■■□□□ 1.53
HDAC11-216ENST00000458642 NUP98P52948 1817 aa24.63■■□□□ 1.53
HDAC11-216ENST00000458642 CAPN15O75808 1086 aa24.62■■□□□ 1.53
HDAC11-216ENST00000458642 MKRN1Q9UHC7 482 aaKnown RBP24.62■■□□□ 1.53
HDAC11-216ENST00000458642 RGL2O15211 777 aa24.61■■□□□ 1.53
HDAC11-216ENST00000458642 EIF4A1P60842 406 aaKnown RBP24.61■■□□□ 1.53
HDAC11-216ENST00000458642 L3MBTL3Q96JM7 780 aaPredicted RBP24.61■■□□□ 1.53
HDAC11-216ENST00000458642 TAF1DQ9H5J8 278 aaPredicted RBP24.61■■□□□ 1.53
HDAC11-216ENST00000458642 RRP7AQ9Y3A4 280 aaKnown RBP24.61■■□□□ 1.53
HDAC11-216ENST00000458642 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
HDAC11-216ENST00000458642 SCN4AP35499 1836 aa24.6■■□□□ 1.53
HDAC11-216ENST00000458642 COL4A5P29400 1685 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 MYL6BP14649 208 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 GPTP24298 496 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 GTF2E1P29083 439 aaPredicted RBP24.59■■□□□ 1.53
HDAC11-216ENST00000458642 TNS4Q8IZW8 715 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 CREBZFQ9NS37 354 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 MAP3K15Q6ZN16 1313 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 UBN2Q6ZU65 1347 aa24.59■■□□□ 1.53
HDAC11-216ENST00000458642 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
HDAC11-216ENST00000458642 ZBTB3Q9H5J0 574 aa24.58■■□□□ 1.53
HDAC11-216ENST00000458642 IQCA1LA6NCM1 817 aa24.57■■□□□ 1.52
HDAC11-216ENST00000458642 NFE2L2Q16236 605 aa24.57■■□□□ 1.52
HDAC11-216ENST00000458642 CRY2Q49AN0 593 aa24.57■■□□□ 1.52
HDAC11-216ENST00000458642 PASKQ96RG2 1323 aa24.57■■□□□ 1.52
HDAC11-216ENST00000458642 ADAMTSL1Q8N6G6 1762 aa24.57■■□□□ 1.52
HDAC11-216ENST00000458642 IARSP41252 1262 aaKnown RBP24.56■■□□□ 1.52
HDAC11-216ENST00000458642 EAPPQ56P03 285 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-216ENST00000458642 LDHDQ86WU2 507 aa24.56■■□□□ 1.52
HDAC11-216ENST00000458642 RTKN2Q8IZC4 609 aa24.56■■□□□ 1.52
HDAC11-216ENST00000458642 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
HDAC11-216ENST00000458642 RNF123Q5XPI4 1314 aa24.56■■□□□ 1.52
HDAC11-216ENST00000458642 ERVV-1B6SEH8 477 aa24.55■■□□□ 1.52
HDAC11-216ENST00000458642 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
HDAC11-216ENST00000458642 SUSD4Q5VX71 490 aa24.55■■□□□ 1.52
HDAC11-216ENST00000458642 C3orf67Q6ZVT6 689 aa24.55■■□□□ 1.52
HDAC11-216ENST00000458642 NEFMP07197 916 aa24.54■■□□□ 1.52
HDAC11-216ENST00000458642 KIF6Q6ZMV9 814 aa24.54■■□□□ 1.52
HDAC11-216ENST00000458642 FZD9O00144 591 aa24.53■■□□□ 1.52
HDAC11-216ENST00000458642 ITGBL1O95965 494 aaPredicted RBP24.53■■□□□ 1.52
HDAC11-216ENST00000458642 NYXQ9GZU5 481 aa24.53■■□□□ 1.52
HDAC11-216ENST00000458642 HACL1Q9UJ83 578 aa24.53■■□□□ 1.52
HDAC11-216ENST00000458642 EPHX2P34913 555 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms