RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 PPP2R2DQ66LE6 453 aa7.53□□□□□ -1.2
PCGEM1-201ENST00000454040 GIMAP6Q6P9H5 292 aa7.53□□□□□ -1.2
PCGEM1-201ENST00000454040 HIRIP3Q9BW71 556 aaPredicted RBP7.53□□□□□ -1.2
PCGEM1-201ENST00000454040 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
PCGEM1-201ENST00000454040 PPP1R1BQ9UD71 204 aaPredicted RBP7.53□□□□□ -1.2
PCGEM1-201ENST00000454040 DNMBPQ6XZF7 1577 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 COL17A1Q9UMD9 1497 aaPredicted RBP7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 ATG7O95352 703 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 UBXN4Q92575 508 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 TRIM52Q96A61 297 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 RRBP1Q9P2E9 1410 aaKnown RBP7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 CUX2O14529 1486 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
PCGEM1-201ENST00000454040 PALM3A6NDB9 673 aaPredicted RBP7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 BMP4P12644 408 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 TMED8Q6PL24 325 aaPredicted RBP7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 ZNF662Q6ZS27 426 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 TSC1Q92574 1164 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 CUL7Q14999 1698 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 LAMC3Q9Y6N6 1575 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 FGD5Q6ZNL6 1462 aa7.51□□□□□ -1.21
PCGEM1-201ENST00000454040 ERCC3P19447 782 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 DIEXFQ68CQ4 756 aaKnown RBP7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 CARMIL1Q5VZK9 1371 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 FGD1P98174 961 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 NBPF20Q3BBV1 942 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 TIMMDC1Q9NPL8 285 aa7.5□□□□□ -1.21
PCGEM1-201ENST00000454040 FANCD2Q9BXW9 1451 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 ABCA10Q8WWZ4 1543 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 THBS1P07996 1170 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 PHLDB3Q6NSJ2 640 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
PCGEM1-201ENST00000454040 FHAD1B1AJZ9 1412 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 SPATA31C2B4DYI2 1134 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 SOCS7O14512 581 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 SLC27A3Q5K4L6 730 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 UCN2Q96RP3 112 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
PCGEM1-201ENST00000454040 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 EFCAB5A4FU69 1503 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 MEN1O00255 615 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 C2CD2LO14523 706 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 MARCH6O60337 910 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 CHSY3Q70JA7 882 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
PCGEM1-201ENST00000454040 ATP5J2-PTCD1G3V325 749 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 APBA3O96018 575 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 H2AFB2P0C5Z0 115 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 ARAFP10398 606 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 TRIM11Q96F44 468 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 WDR97A6NE52 1622 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 CFAP43Q8NDM7 1665 aa7.46□□□□□ -1.21
PCGEM1-201ENST00000454040 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.22
PCGEM1-201ENST00000454040 TOPBP1Q92547 1522 aa7.46□□□□□ -1.22
PCGEM1-201ENST00000454040 GPR37L1O60883 481 aa7.46□□□□□ -1.22
PCGEM1-201ENST00000454040 CENPBP07199 599 aaPredicted RBP7.46□□□□□ -1.22
PCGEM1-201ENST00000454040 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
PCGEM1-201ENST00000454040 RECKO95980 971 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 VAMP1P23763 118 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 RAB15P59190 212 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 NPAS4Q8IUM7 802 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 HELBQ8NG08 1087 aaPredicted RBP7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 PRM3Q9NNZ6 103 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 CCNB3Q8WWL7 1395 aa7.45□□□□□ -1.22
PCGEM1-201ENST00000454040 SPDYE3A6NKU9 549 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 DPH6Q7L8W6 267 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 TAS1R3Q7RTX0 852 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 ALG2Q9H553 416 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 PRDM16Q9HAZ2 1276 aa7.44□□□□□ -1.22
PCGEM1-201ENST00000454040 A0A1W2PRU2 124 aa7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 WASLO00401 505 aaPredicted RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 TAGLNQ01995 201 aaKnown RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 UBAP2LQ14157 1087 aaKnown RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 PRRT3Q5FWE3 981 aa7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 KANK4Q5T7N3 995 aaPredicted RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 GJD4Q96KN9 370 aaPredicted RBP7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 NLRP3Q96P20 1036 aa7.43□□□□□ -1.22
PCGEM1-201ENST00000454040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms