RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CEP290O15078 2479 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 ABCC6O95255 1503 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 CASP8AP2Q9UKL3 1982 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 USP54Q70EL1 1684 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 POLR3AO14802 1390 aaPredicted RBP8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 BRCA1P38398 1863 aaKnown RBP8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 GPR37O15354 613 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 DEFB115Q30KQ5 88 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 MPNDQ8N594 471 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 MEGF6O75095 1541 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 ADAMTS7Q9UKP4 1686 aa8.11□□□□□ -1.11
SBDSP1-204ENST00000453858 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 DGKZQ13574 1117 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 NLRP13Q86W25 1043 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 AK7Q96M32 723 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 PIK3C2GO75747 1445 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 PPIP5K1Q6PFW1 1433 aa8.1□□□□□ -1.11
SBDSP1-204ENST00000453858 CACNA1AO00555 2505 aa8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 ARFGEF1Q9Y6D6 1849 aa8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 ARHGAP33O14559 1287 aa8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 PTPREP23469 700 aa8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 NUDT16Q96DE0 195 aaKnown RBP8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 ADAM33Q9BZ11 813 aa8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
SBDSP1-204ENST00000453858 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 ACEP12821 1306 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 MAP2K5Q13163 448 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 ARHGEF25Q86VW2 580 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 NPDC1Q9NQX5 325 aaPredicted RBP8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 LAMA2P24043 3122 aaKnown RBP8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 EIF3AQ14152 1382 aaKnown RBP8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 CCDC7Q96M83 1385 aa8.08□□□□□ -1.12
SBDSP1-204ENST00000453858 PRUNE2Q8WUY3 3088 aa8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 TK2O00142 265 aa8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 MMP10P09238 476 aa8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 EYSQ5T1H1 3165 aa8.07□□□□□ -1.12
SBDSP1-204ENST00000453858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 SLC24A3Q9HC58 644 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 POGKQ9P215 609 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 ROCK1Q13464 1354 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 ANKRD36BQ8N2N9 1353 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 THSD7BQ9C0I4 1608 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 LTBP1Q14766 1721 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 TOGARAM1Q9Y4F4 1720 aa8.06□□□□□ -1.12
SBDSP1-204ENST00000453858 ZBTB7CA1YPR0 619 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 PPP1R3GB7ZBB8 358 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 IRF6O14896 467 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 LMNB1P20700 586 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 DALRD3Q5D0E6 543 aaKnown RBP8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 CFAP70Q5T0N1 1121 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 CDHR5Q9HBB8 845 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 PIM2Q9P1W9 311 aa8.05□□□□□ -1.12
SBDSP1-204ENST00000453858 SLIT3O75094 1523 aa8.04□□□□□ -1.12
SBDSP1-204ENST00000453858 IL2RBP14784 551 aa8.04□□□□□ -1.12
SBDSP1-204ENST00000453858 RASSF7Q02833 373 aa8.04□□□□□ -1.12
SBDSP1-204ENST00000453858 ADGRD1Q6QNK2 874 aa8.04□□□□□ -1.12
SBDSP1-204ENST00000453858 GPR101Q96P66 508 aaPredicted RBP8.04□□□□□ -1.12
SBDSP1-204ENST00000453858 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 RGPD5Q99666 1765 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 CA12O43570 354 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 OATP04181 439 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 PRSS12P56730 875 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 BEGAINQ9BUH8 593 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 TTC28Q96AY4 2481 aa8.03□□□□□ -1.12
SBDSP1-204ENST00000453858 CSB-PGBD3P0DP91 1061 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 SSFA2P28290 1259 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 MAP2K2P36507 400 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 TTC13Q8NBP0 860 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 SYTL4Q96C24 671 aaPredicted RBP8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 CAPNS2Q96L46 248 aa8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 CPSF1Q10570 1443 aaKnown RBP8.02□□□□□ -1.13
SBDSP1-204ENST00000453858 UBR3Q6ZT12 1888 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 HRO43593 1189 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 RGL3Q3MIN7 710 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 CDCA7LQ96GN5 454 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 C5P01031 1676 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 TAF1LQ8IZX4 1826 aa8.01□□□□□ -1.13
SBDSP1-204ENST00000453858 ITSN1Q15811 1721 aa8□□□□□ -1.13
SBDSP1-204ENST00000453858 TRIM66O15016 1216 aa8□□□□□ -1.13
SBDSP1-204ENST00000453858 AOC2O75106 756 aa8□□□□□ -1.13
SBDSP1-204ENST00000453858 CYP4F22Q6NT55 531 aa8□□□□□ -1.13
SBDSP1-204ENST00000453858 HMGB2P26583 209 aaKnown RBP7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 FAM50AQ14320 339 aaKnown RBP7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 PACS2Q86VP3 889 aa7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 CCDC102AQ96A19 550 aa7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 KCNK17Q96T54 332 aa7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 TAF1DQ9H5J8 278 aaPredicted RBP7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 HCSTQ9UBK5 93 aa7.99□□□□□ -1.13
SBDSP1-204ENST00000453858 USP47Q96K76 1375 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 C4BP0C0L5 1744 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 NFKBIEO00221 500 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms