RNA–Protein interactions for RNA: ENST00000447973.5

EWSR1-213, Transcript of EWS RNA binding protein 1, humanhuman

TSL 4

Gene EWSR1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-213ENST00000447973 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
EWSR1-213ENST00000447973 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.534e-17■□□□□ 10
EWSR1-213ENST00000447973 CNBD1Q8NA66 436 aa18.39■□□□□ 0.53
EWSR1-213ENST00000447973 C7orf43Q8WVR3 580 aa18.39■□□□□ 0.53
EWSR1-213ENST00000447973 CACNA1SQ13698 1873 aa18.38■□□□□ 0.53
EWSR1-213ENST00000447973 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
EWSR1-213ENST00000447973 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
EWSR1-213ENST00000447973 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
EWSR1-213ENST00000447973 PRPF40BQ6NWY9 871 aaKnown RBP18.37■□□□□ 0.53
EWSR1-213ENST00000447973 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
EWSR1-213ENST00000447973 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
EWSR1-213ENST00000447973 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
EWSR1-213ENST00000447973 POTEIP0CG38 1075 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 POTEJP0CG39 1038 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 ARFGEF2Q9Y6D5 1785 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 PCNTO95613 3336 aa18.36■□□□□ 0.53
EWSR1-213ENST00000447973 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
EWSR1-213ENST00000447973 HLFQ16534 295 aa18.35■□□□□ 0.53
EWSR1-213ENST00000447973 DDNO94850 711 aaPredicted RBP18.34■□□□□ 0.53
EWSR1-213ENST00000447973 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
EWSR1-213ENST00000447973 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
EWSR1-213ENST00000447973 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
EWSR1-213ENST00000447973 TAOK3Q9H2K8 898 aa18.34■□□□□ 0.53
EWSR1-213ENST00000447973 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
EWSR1-213ENST00000447973 ST5P78524 1137 aa18.33■□□□□ 0.52
EWSR1-213ENST00000447973 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
EWSR1-213ENST00000447973 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
EWSR1-213ENST00000447973 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
EWSR1-213ENST00000447973 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
EWSR1-213ENST00000447973 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
EWSR1-213ENST00000447973 NIP7Q9Y221 180 aaKnown RBP eCLIP18.31■□□□□ 0.52
EWSR1-213ENST00000447973 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
EWSR1-213ENST00000447973 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
EWSR1-213ENST00000447973 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
EWSR1-213ENST00000447973 NPHP1O15259 732 aa18.29■□□□□ 0.52
EWSR1-213ENST00000447973 NPR1P16066 1061 aa18.29■□□□□ 0.52
EWSR1-213ENST00000447973 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
EWSR1-213ENST00000447973 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
EWSR1-213ENST00000447973 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
EWSR1-213ENST00000447973 SNED1Q8TER0 1413 aa18.29■□□□□ 0.52
EWSR1-213ENST00000447973 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
EWSR1-213ENST00000447973 ZNF277Q9NRM2 450 aaPredicted RBP18.28■□□□□ 0.52
EWSR1-213ENST00000447973 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
EWSR1-213ENST00000447973 ZNF541Q9H0D2 1346 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 RGL2O15211 777 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 TTLL7Q6ZT98 887 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 ZNF652Q9Y2D9 606 aa18.27■□□□□ 0.52
EWSR1-213ENST00000447973 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
EWSR1-213ENST00000447973 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
EWSR1-213ENST00000447973 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
EWSR1-213ENST00000447973 SOGA3Q5TF21 947 aa18.26■□□□□ 0.51
EWSR1-213ENST00000447973 L3MBTL3Q96JM7 780 aaPredicted RBP18.26■□□□□ 0.51
EWSR1-213ENST00000447973 COL4A5P29400 1685 aa18.25■□□□□ 0.51
EWSR1-213ENST00000447973 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
EWSR1-213ENST00000447973 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
EWSR1-213ENST00000447973 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.518e-8■■■■■ 39.6
EWSR1-213ENST00000447973 NUTM1Q86Y26 1132 aa18.25■□□□□ 0.51
EWSR1-213ENST00000447973 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
EWSR1-213ENST00000447973 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
EWSR1-213ENST00000447973 NUP98P52948 1817 aa18.25■□□□□ 0.51
EWSR1-213ENST00000447973 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
EWSR1-213ENST00000447973 UBN2Q6ZU65 1347 aa18.23■□□□□ 0.51
EWSR1-213ENST00000447973 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
EWSR1-213ENST00000447973 SCN4AP35499 1836 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 ITGBL1O95965 494 aaPredicted RBP18.22■□□□□ 0.51
EWSR1-213ENST00000447973 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 MKRN1Q9UHC7 482 aaKnown RBP18.22■□□□□ 0.51
EWSR1-213ENST00000447973 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
EWSR1-213ENST00000447973 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
EWSR1-213ENST00000447973 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
EWSR1-213ENST00000447973 SUSD4Q5VX71 490 aa18.21■□□□□ 0.51
EWSR1-213ENST00000447973 FZD9O00144 591 aa18.2■□□□□ 0.5
EWSR1-213ENST00000447973 GPTP24298 496 aa18.2■□□□□ 0.5
EWSR1-213ENST00000447973 MYL6BP14649 208 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 HOXA10P31260 410 aaPredicted RBP18.19■□□□□ 0.5
EWSR1-213ENST00000447973 IARSP41252 1262 aaKnown RBP18.19■□□□□ 0.5
EWSR1-213ENST00000447973 PDIA6Q15084 440 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 LDHDQ86WU2 507 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
EWSR1-213ENST00000447973 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
EWSR1-213ENST00000447973 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
EWSR1-213ENST00000447973 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
EWSR1-213ENST00000447973 RNF123Q5XPI4 1314 aa18.18■□□□□ 0.5
EWSR1-213ENST00000447973 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
EWSR1-213ENST00000447973 IQCA1LA6NCM1 817 aa18.17■□□□□ 0.5
EWSR1-213ENST00000447973 CAPN15O75808 1086 aa18.17■□□□□ 0.5
EWSR1-213ENST00000447973 NTSR2O95665 410 aa18.17■□□□□ 0.5
EWSR1-213ENST00000447973 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms