RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CCT4P50991 539 aaKnown RBP26.72■■□□□ 1.87
VPS13B-204ENST00000441350 RIC3Q7Z5B4 369 aa26.72■■□□□ 1.87
VPS13B-204ENST00000441350 ITPRIPQ8IWB1 547 aa26.72■■□□□ 1.87
VPS13B-204ENST00000441350 ZNF330Q9Y3S2 320 aaPredicted RBP26.72■■□□□ 1.87
VPS13B-204ENST00000441350 ARFGEF2Q9Y6D5 1785 aa26.71■■□□□ 1.87
VPS13B-204ENST00000441350 RPS6KA4O75676 772 aa26.7■■□□□ 1.86
VPS13B-204ENST00000441350 DDX19BQ9UMR2 479 aa26.7■■□□□ 1.86
VPS13B-204ENST00000441350 ATP10DQ9P241 1426 aa26.7■■□□□ 1.86
VPS13B-204ENST00000441350 BEND3Q5T5X7 828 aa26.69■■□□□ 1.86
VPS13B-204ENST00000441350 CAMKK2Q96RR4 588 aa26.69■■□□□ 1.86
VPS13B-204ENST00000441350 METTL22Q9BUU2 404 aaPredicted RBP26.68■■□□□ 1.86
VPS13B-204ENST00000441350 COL15A1P39059 1388 aa26.68■■□□□ 1.86
VPS13B-204ENST00000441350 KIF6Q6ZMV9 814 aa26.68■■□□□ 1.86
VPS13B-204ENST00000441350 NPM2Q86SE8 214 aaKnown RBP26.68■■□□□ 1.86
VPS13B-204ENST00000441350 MAP3K15Q6ZN16 1313 aa26.67■■□□□ 1.86
VPS13B-204ENST00000441350 GNPATO15228 680 aa26.67■■□□□ 1.86
VPS13B-204ENST00000441350 SF3B2Q13435 895 aaKnown RBP26.67■■□□□ 1.86
VPS13B-204ENST00000441350 CCDC125Q86Z20 511 aa26.67■■□□□ 1.86
VPS13B-204ENST00000441350 ZBTB7BO15156 539 aaPredicted RBP26.66■■□□□ 1.86
VPS13B-204ENST00000441350 DZIP3Q86Y13 1208 aaKnown RBP26.66■■□□□ 1.86
VPS13B-204ENST00000441350 ZBTB3Q9H5J0 574 aa26.66■■□□□ 1.86
VPS13B-204ENST00000441350 ERVV-1B6SEH8 477 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 EN1Q05925 392 aaPredicted RBP26.65■■□□□ 1.86
VPS13B-204ENST00000441350 AK7Q96M32 723 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 SRCIN1Q9C0H9 1055 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 TBC1D2BQ9UPU7 963 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 RTCBQ9Y3I0 505 aaKnown RBP26.65■■□□□ 1.86
VPS13B-204ENST00000441350 A0A087WZG4 1122 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 LINS1Q8NG48 757 aa26.65■■□□□ 1.86
VPS13B-204ENST00000441350 UBR3Q6ZT12 1888 aa26.64■■□□□ 1.86
VPS13B-204ENST00000441350 BAG6P46379 1132 aa26.64■■□□□ 1.85
VPS13B-204ENST00000441350 AAMPQ13685 434 aa26.64■■□□□ 1.85
VPS13B-204ENST00000441350 AMIGO3Q86WK7 504 aa26.64■■□□□ 1.85
VPS13B-204ENST00000441350 ALDH1L1O75891 902 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 IGKV5-2P06315 115 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 NEXNQ0ZGT2 675 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 EZH2Q15910 746 aaKnown RBP26.63■■□□□ 1.85
VPS13B-204ENST00000441350 ARXQ96QS3 562 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 MYD88Q99836 296 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 ZBTB40Q9NUA8 1239 aa26.63■■□□□ 1.85
VPS13B-204ENST00000441350 IBTKQ9P2D0 1353 aaPredicted RBP26.63■■□□□ 1.85
VPS13B-204ENST00000441350 CHMP4BQ9H444 224 aaKnown RBP26.62■■□□□ 1.85
VPS13B-204ENST00000441350 CAMTA2O94983 1202 aa26.61■■□□□ 1.85
VPS13B-204ENST00000441350 GIGYF2Q6Y7W6 1299 aaKnown RBP26.61■■□□□ 1.85
VPS13B-204ENST00000441350 NUP98P52948 1817 aa26.61■■□□□ 1.85
VPS13B-204ENST00000441350 HLFQ16534 295 aa26.61■■□□□ 1.85
VPS13B-204ENST00000441350 CWF19L2Q2TBE0 894 aaKnown RBP26.61■■□□□ 1.85
VPS13B-204ENST00000441350 SMIM5Q71RC9 77 aa26.61■■□□□ 1.85
VPS13B-204ENST00000441350 AKT1S1Q96B36 256 aa26.61■■□□□ 1.85
VPS13B-204ENST00000441350 BCORQ6W2J9 1755 aa26.6■■□□□ 1.85
VPS13B-204ENST00000441350 NEURL1BA8MQ27 555 aa26.6■■□□□ 1.85
VPS13B-204ENST00000441350 ADRA2BP18089 450 aa26.6■■□□□ 1.85
VPS13B-204ENST00000441350 TCIRG1Q13488 830 aa26.6■■□□□ 1.85
VPS13B-204ENST00000441350 DEFB132Q7Z7B7 95 aa26.6■■□□□ 1.85
VPS13B-204ENST00000441350 MEIS3Q99687 375 aa26.59■■□□□ 1.85
VPS13B-204ENST00000441350 USP44Q9H0E7 712 aa26.59■■□□□ 1.85
VPS13B-204ENST00000441350 RGL2O15211 777 aa26.58■■□□□ 1.85
VPS13B-204ENST00000441350 ARHGEF1Q92888 912 aaKnown RBP26.58■■□□□ 1.85
VPS13B-204ENST00000441350 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.85
VPS13B-204ENST00000441350 NARFQ9UHQ1 456 aa26.58■■□□□ 1.85
VPS13B-204ENST00000441350 C4AP0C0L4 1744 aa26.58■■□□□ 1.85
VPS13B-204ENST00000441350 ATP5J2-PTCD1G3V325 749 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 SSFA2P28290 1259 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 ZNF827Q17R98 1081 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 HSP90AB3PQ58FF7 597 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 TRAPPC3LQ5T215 181 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 PPP4R2Q9NY27 417 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 AFDNP55196 1824 aaKnown RBP26.57■■□□□ 1.84
VPS13B-204ENST00000441350 ANKRD36CQ5JPF3 1778 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 TRIM28Q13263 835 aaKnown RBP26.57■■□□□ 1.84
VPS13B-204ENST00000441350 SCN7AQ01118 1682 aa26.57■■□□□ 1.84
VPS13B-204ENST00000441350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.56■■□□□ 1.84
VPS13B-204ENST00000441350 GCKRQ14397 625 aa26.56■■□□□ 1.84
VPS13B-204ENST00000441350 PHF14O94880 888 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 GNAI3P08754 354 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 CLEC4GQ6UXB4 293 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 CCDC191Q8NCU4 936 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 UTYO14607 1347 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 ZNF34Q8IZ26 560 aa26.54■■□□□ 1.84
VPS13B-204ENST00000441350 TUBGCP6Q96RT7 1819 aa26.53■■□□□ 1.84
VPS13B-204ENST00000441350 RFC4P35249 363 aa26.53■■□□□ 1.84
VPS13B-204ENST00000441350 UPF1Q92900 1129 aaKnown RBP eCLIP26.53■■□□□ 1.84
VPS13B-204ENST00000441350 BCL2L12Q9HB09 334 aa26.53■■□□□ 1.84
VPS13B-204ENST00000441350 ZNF652Q9Y2D9 606 aa26.53■■□□□ 1.84
VPS13B-204ENST00000441350 USP42Q9H9J4 1324 aaKnown RBP26.52■■□□□ 1.84
VPS13B-204ENST00000441350 GRM8O00222 908 aa26.52■■□□□ 1.84
VPS13B-204ENST00000441350 NBPF7P0C2Y1 421 aaPredicted RBP26.52■■□□□ 1.84
VPS13B-204ENST00000441350 CWC25Q9NXE8 425 aaPredicted RBP26.52■■□□□ 1.84
VPS13B-204ENST00000441350 TFCP2L1Q9NZI6 479 aa26.52■■□□□ 1.84
VPS13B-204ENST00000441350 SRP68Q9UHB9 627 aaKnown RBP26.52■■□□□ 1.84
VPS13B-204ENST00000441350 PCDHB15Q9Y5E8 787 aa26.52■■□□□ 1.84
VPS13B-204ENST00000441350 ZPR1O75312 459 aa26.51■■□□□ 1.83
VPS13B-204ENST00000441350 USPL1Q5W0Q7 1092 aa26.51■■□□□ 1.83
VPS13B-204ENST00000441350 C9orf78Q9NZ63 289 aaPredicted RBP26.51■■□□□ 1.83
VPS13B-204ENST00000441350 UBTFL1P0CB47 393 aaPredicted RBP26.5■■□□□ 1.83
VPS13B-204ENST00000441350 NLRP10Q86W26 655 aa26.5■■□□□ 1.83
VPS13B-204ENST00000441350 C1orf115Q9H7X2 142 aa26.5■■□□□ 1.83
VPS13B-204ENST00000441350 ANO8Q9HCE9 1232 aaPredicted RBP26.5■■□□□ 1.83
VPS13B-204ENST00000441350 GPTP24298 496 aa26.49■■□□□ 1.83
VPS13B-204ENST00000441350 GNAI2P04899 355 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms