RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 NEUROD1Q13562 356 aa12.78□□□□□ -0.36
RPE-210ENST00000438204 TBC1D9BQ66K14 1250 aa12.78□□□□□ -0.36
RPE-210ENST00000438204 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
RPE-210ENST00000438204 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
RPE-210ENST00000438204 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
RPE-210ENST00000438204 PDE6BP35913 854 aa12.77□□□□□ -0.37
RPE-210ENST00000438204 MAP2K2P36507 400 aa12.77□□□□□ -0.37
RPE-210ENST00000438204 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
RPE-210ENST00000438204 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.37
RPE-210ENST00000438204 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
RPE-210ENST00000438204 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
RPE-210ENST00000438204 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
RPE-210ENST00000438204 ZIC5Q96T25 663 aa12.76□□□□□ -0.37
RPE-210ENST00000438204 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
RPE-210ENST00000438204 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
RPE-210ENST00000438204 MTHFSP49914 203 aa12.75□□□□□ -0.37
RPE-210ENST00000438204 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
RPE-210ENST00000438204 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
RPE-210ENST00000438204 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
RPE-210ENST00000438204 SRGNP10124 158 aa12.74□□□□□ -0.37
RPE-210ENST00000438204 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
RPE-210ENST00000438204 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPE-210ENST00000438204 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
RPE-210ENST00000438204 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
RPE-210ENST00000438204 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
RPE-210ENST00000438204 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
RPE-210ENST00000438204 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
RPE-210ENST00000438204 MRC1P22897 1456 aa12.73□□□□□ -0.37
RPE-210ENST00000438204 FZD9O00144 591 aa12.73□□□□□ -0.37
RPE-210ENST00000438204 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
RPE-210ENST00000438204 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
RPE-210ENST00000438204 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
RPE-210ENST00000438204 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
RPE-210ENST00000438204 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
RPE-210ENST00000438204 EPS15P42566 896 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 SCNN1DP51172 638 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 GPC2Q8N158 579 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
RPE-210ENST00000438204 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.37
RPE-210ENST00000438204 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
RPE-210ENST00000438204 NPHP1O15259 732 aa12.7□□□□□ -0.38
RPE-210ENST00000438204 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
RPE-210ENST00000438204 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
RPE-210ENST00000438204 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
RPE-210ENST00000438204 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
RPE-210ENST00000438204 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
RPE-210ENST00000438204 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
RPE-210ENST00000438204 ST5P78524 1137 aa12.69□□□□□ -0.38
RPE-210ENST00000438204 GLIS2Q9BZE0 524 aaPredicted RBP12.69□□□□□ -0.38
RPE-210ENST00000438204 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
RPE-210ENST00000438204 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
RPE-210ENST00000438204 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
RPE-210ENST00000438204 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
RPE-210ENST00000438204 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
RPE-210ENST00000438204 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
RPE-210ENST00000438204 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
RPE-210ENST00000438204 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
RPE-210ENST00000438204 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPE-210ENST00000438204 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
RPE-210ENST00000438204 NOGQ13253 232 aa12.66□□□□□ -0.38
RPE-210ENST00000438204 USP50Q70EL3 339 aaPredicted RBP12.66□□□□□ -0.38
RPE-210ENST00000438204 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
RPE-210ENST00000438204 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
RPE-210ENST00000438204 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
RPE-210ENST00000438204 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
RPE-210ENST00000438204 JDP2Q8WYK2 163 aa12.65□□□□□ -0.38
RPE-210ENST00000438204 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
RPE-210ENST00000438204 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
RPE-210ENST00000438204 A0A087WZG4 1122 aa12.64□□□□□ -0.39
RPE-210ENST00000438204 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
RPE-210ENST00000438204 NPR1P16066 1061 aa12.64□□□□□ -0.39
RPE-210ENST00000438204 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
RPE-210ENST00000438204 TRPA1O75762 1119 aa12.63□□□□□ -0.39
RPE-210ENST00000438204 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
RPE-210ENST00000438204 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
RPE-210ENST00000438204 POLR2AP24928 1970 aaKnown RBP12.63□□□□□ -0.39
RPE-210ENST00000438204 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
RPE-210ENST00000438204 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
RPE-210ENST00000438204 HUNKP57058 714 aa12.62□□□□□ -0.39
RPE-210ENST00000438204 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
RPE-210ENST00000438204 SZT2Q5T011 3432 aa12.61□□□□□ -0.39
RPE-210ENST00000438204 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
RPE-210ENST00000438204 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
RPE-210ENST00000438204 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
RPE-210ENST00000438204 PSMD1Q99460 953 aa12.61□□□□□ -0.39
RPE-210ENST00000438204 ADARB2Q9NS39 739 aaKnown RBP12.61□□□□□ -0.39
RPE-210ENST00000438204 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
RPE-210ENST00000438204 STARD3NLO95772 234 aa12.6□□□□□ -0.39
RPE-210ENST00000438204 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
RPE-210ENST00000438204 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
RPE-210ENST00000438204 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
RPE-210ENST00000438204 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
RPE-210ENST00000438204 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
RPE-210ENST00000438204 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
RPE-210ENST00000438204 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
RPE-210ENST00000438204 DLL1O00548 723 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 305.9 ms