RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 GGA1Q9UJY5 639 aa5.78□□□□□ -1.48
UBE4A-202ENST00000431736 PPP1R12BO60237 982 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC57Q2TAC2 916 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 SYNE4Q8N205 404 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 RIMBP2O15034 1052 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 EPHX2P34913 555 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 IARSP41252 1262 aaKnown RBP5.77□□□□□ -1.49
UBE4A-202ENST00000431736 NFE2L2Q16236 605 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 RTL5Q5HYW3 569 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-202ENST00000431736 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 NWD2Q9ULI1 1742 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 ZSCAN29Q8IWY8 852 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-202ENST00000431736 SH3TC1Q8TE82 1336 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 KNDC1Q76NI1 1749 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 BBOX1O75936 387 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 TNFAIP1Q13829 316 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 FAM9BQ8IZU0 186 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 ANKRD2Q9GZV1 360 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 ZBTB1Q9Y2K1 713 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 QRICH2Q9H0J4 1663 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 CAVIN4Q5BKX8 364 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 ZNF804AQ7Z570 1209 aa5.77□□□□□ -1.49
UBE4A-202ENST00000431736 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-202ENST00000431736 CAMTA1Q9Y6Y1 1673 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 NBPF15Q8N660 670 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 DBF4Q9UBU7 674 aaPredicted RBP5.76□□□□□ -1.49
UBE4A-202ENST00000431736 GLTPD2A6NH11 291 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 UFL1O94874 794 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 MS4A1P11836 297 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 NFIXQ14938 502 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC24Q8N4L8 307 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 FKBP4Q02790 459 aaKnown RBP eCLIP5.76□□□□□ -1.49
UBE4A-202ENST00000431736 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 PRPF40BQ6NWY9 871 aaKnown RBP5.76□□□□□ -1.49
UBE4A-202ENST00000431736 MCM10Q7L590 875 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 AEBP1Q8IUX7 1158 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 VEZTQ9HBM0 779 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 USP42Q9H9J4 1324 aaKnown RBP5.76□□□□□ -1.49
UBE4A-202ENST00000431736 MTHFSDQ2M296 383 aaKnown RBP5.76□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC102AQ96A19 550 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 CSADQ9Y600 493 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 IFT172Q9UG01 1749 aa5.76□□□□□ -1.49
UBE4A-202ENST00000431736 IPO8O15397 1037 aaKnown RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 CELF2O95319 508 aaKnown RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 SREBF2Q12772 1141 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 FTSJ3Q8IY81 847 aaKnown RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 CWC25Q9NXE8 425 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 ANKRD18BA2A2Z9 1011 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 FKBP8Q14318 412 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 NMRK2Q9NPI5 230 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 ELL2O00472 640 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 SLC4A8Q2Y0W8 1093 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 ZNF157P51786 506 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 HUNKP57058 714 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 SUPT20HL1Q3ZLR7 823 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 CDC37L1Q7L3B6 337 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 ZNF277Q9NRM2 450 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 GYS1P13807 737 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 HOXD10P28358 340 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC146Q8IYE0 955 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 REM2Q8IYK8 340 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 GLI3P10071 1580 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 ERBB4Q15303 1308 aa5.75□□□□□ -1.49
UBE4A-202ENST00000431736 COL22A1Q8NFW1 1626 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-202ENST00000431736 A1BGP04217 495 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 RASSF7Q02833 373 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 KRT26Q7Z3Y9 468 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 LRRC4BQ9NT99 713 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 NKX1-1Q15270 411 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 IFIT5Q13325 482 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 DLGAP5Q15398 846 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 ZNF496Q96IT1 587 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 MYBBP1AQ9BQG0 1328 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 IFIT1P09914 478 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 HSPA1AP0DMV8 641 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 HSPA1BP0DMV9 641 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 MYD88Q99836 296 aa5.74□□□□□ -1.49
UBE4A-202ENST00000431736 ADARB2Q9NS39 739 aaKnown RBP5.74□□□□□ -1.49
UBE4A-202ENST00000431736 ANKRD13DQ6ZTN6 518 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 CNTROBQ8N137 903 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 IREB2P48200 963 aaKnown RBP5.73□□□□□ -1.49
UBE4A-202ENST00000431736 NOGQ13253 232 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 NBPF11Q86T75 865 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 GCC1Q96CN9 775 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 KLRG1Q96E93 195 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 ATP2B4P23634 1241 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 PPP2R1AP30153 589 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 CHAF1AQ13111 956 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-202ENST00000431736 USP50Q70EL3 339 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-202ENST00000431736 SLC10A4Q96EP9 437 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 ERVV-1B6SEH8 477 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 IRS4O14654 1257 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-202ENST00000431736 ITPK1Q13572 414 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 GPR101Q96P66 508 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-202ENST00000431736 ZNRF3Q9ULT6 936 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 MAST3O60307 1309 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 KIF7Q2M1P5 1343 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 RNF123Q5XPI4 1314 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 NRXN3Q9Y4C0 1643 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms