RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 GIGYF1O75420 1035 aaPredicted RBP20.37■□□□□ 0.85
TOM1-204ENST00000411850 C1orf141Q5JVX7 400 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
TOM1-204ENST00000411850 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
TOM1-204ENST00000411850 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
TOM1-204ENST00000411850 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 PXDNQ92626 1479 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 LMTK3Q96Q04 1460 aa20.37■□□□□ 0.85
TOM1-204ENST00000411850 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
TOM1-204ENST00000411850 KDM4FA0A1W2PPD8 638 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
TOM1-204ENST00000411850 CADPS2Q86UW7 1296 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 RASEFQ8IZ41 740 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 TMEM87AQ8NBN3 555 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 LIMCH1Q9UPQ0 1083 aa20.36■□□□□ 0.85
TOM1-204ENST00000411850 MSNP26038 577 aaKnown RBP20.35■□□□□ 0.85
TOM1-204ENST00000411850 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
TOM1-204ENST00000411850 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
TOM1-204ENST00000411850 AK2P54819 239 aa20.35■□□□□ 0.85
TOM1-204ENST00000411850 GPATCH3Q96I76 525 aa20.35■□□□□ 0.85
TOM1-204ENST00000411850 DIAPH3Q9NSV4 1193 aa20.35■□□□□ 0.85
TOM1-204ENST00000411850 NOL7Q9UMY1 257 aaKnown RBP20.35■□□□□ 0.85
TOM1-204ENST00000411850 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
TOM1-204ENST00000411850 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
TOM1-204ENST00000411850 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
TOM1-204ENST00000411850 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.34■□□□□ 0.85
TOM1-204ENST00000411850 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
TOM1-204ENST00000411850 PHF14O94880 888 aa20.33■□□□□ 0.85
TOM1-204ENST00000411850 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
TOM1-204ENST00000411850 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
TOM1-204ENST00000411850 KCNB2Q92953 911 aa20.33■□□□□ 0.85
TOM1-204ENST00000411850 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
TOM1-204ENST00000411850 UTYO14607 1347 aa20.33■□□□□ 0.84
TOM1-204ENST00000411850 TSPY26PQ9H489 355 aa20.32■□□□□ 0.84
TOM1-204ENST00000411850 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
TOM1-204ENST00000411850 ZSCAN22P10073 491 aaPredicted RBP20.32■□□□□ 0.84
TOM1-204ENST00000411850 LINS1Q8NG48 757 aa20.32■□□□□ 0.84
TOM1-204ENST00000411850 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
TOM1-204ENST00000411850 OFD1O75665 1012 aa20.31■□□□□ 0.84
TOM1-204ENST00000411850 IFIT2P09913 472 aaKnown RBP20.31■□□□□ 0.84
TOM1-204ENST00000411850 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
TOM1-204ENST00000411850 EVI5LQ96CN4 794 aa20.31■□□□□ 0.84
TOM1-204ENST00000411850 TM6SF1Q9BZW5 370 aa20.31■□□□□ 0.84
TOM1-204ENST00000411850 GADD45BO75293 160 aaPredicted RBP20.31■□□□□ 0.84
TOM1-204ENST00000411850 PRKCSHP14314 528 aaPredicted RBP20.31■□□□□ 0.84
TOM1-204ENST00000411850 NPHP3Q7Z494 1330 aa20.31■□□□□ 0.84
TOM1-204ENST00000411850 AXIN2Q9Y2T1 843 aa20.3■□□□□ 0.84
TOM1-204ENST00000411850 ZNF500O60304 480 aaPredicted RBP20.3■□□□□ 0.84
TOM1-204ENST00000411850 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
TOM1-204ENST00000411850 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
TOM1-204ENST00000411850 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
TOM1-204ENST00000411850 STX6O43752 255 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 PTH1RQ03431 593 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
TOM1-204ENST00000411850 GDPD2Q9HCC8 539 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
TOM1-204ENST00000411850 PA2G4Q9UQ80 394 aaKnown RBP20.29■□□□□ 0.84
TOM1-204ENST00000411850 GRM8O00222 908 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 DDX58O95786 925 aaKnown RBP20.29■□□□□ 0.84
TOM1-204ENST00000411850 TPM2P07951 284 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 SYT1P21579 422 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 MCM5P33992 734 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
TOM1-204ENST00000411850 ZSWIM6Q9HCJ5 1215 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
TOM1-204ENST00000411850 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
TOM1-204ENST00000411850 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
TOM1-204ENST00000411850 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
TOM1-204ENST00000411850 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
TOM1-204ENST00000411850 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
TOM1-204ENST00000411850 AACSQ86V21 672 aa20.28■□□□□ 0.84
TOM1-204ENST00000411850 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
TOM1-204ENST00000411850 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
TOM1-204ENST00000411850 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
TOM1-204ENST00000411850 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 RGPD5Q99666 1765 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 HIP1O00291 1037 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 NECTIN1Q15223 517 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 SH2B1Q9NRF2 756 aaPredicted RBP20.27■□□□□ 0.84
TOM1-204ENST00000411850 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 ZKSCAN5Q9Y2L8 839 aa20.27■□□□□ 0.84
TOM1-204ENST00000411850 SNRKQ9NRH2 765 aa20.27■□□□□ 0.83
TOM1-204ENST00000411850 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.83
TOM1-204ENST00000411850 CYP46A1Q9Y6A2 500 aa20.27■□□□□ 0.83
TOM1-204ENST00000411850 SASH1O94885 1247 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 F13A1P00488 732 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
TOM1-204ENST00000411850 CCDC171Q6TFL3 1326 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 RNF214Q8ND24 703 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
TOM1-204ENST00000411850 CPA1P15085 419 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 PDIA6Q15084 440 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 FAM184AQ8NB25 1140 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms