RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	XRN1	Q8IZH2	1706 aa	Known RBP	10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	AGER	Q15109	404 aa		10.11	□□□□□ -0.79
CEACAM1-208	ENST00000403461	OCSTAMP	Q9BR26	566 aa		10.11	□□□□□ -0.79
CEACAM1-208	ENST00000403461	SOS2	Q07890	1332 aa	Predicted RBP	10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	NPHP3	Q7Z494	1330 aa		10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	VAC14	Q08AM6	782 aa		10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	CCDC125	Q86Z20	511 aa		10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ORAI2	Q96SN7	254 aa		10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	AAAS	Q9NRG9	546 aa		10.1	□□□□□ -0.79
CEACAM1-208	ENST00000403461	RPGRIP1L	Q68CZ1	1315 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	HFM1	A2PYH4	1435 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ZBTB33	Q86T24	672 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	CYP4X1	Q8N118	509 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	LRPPRC	P42704	1394 aa	Known RBP	10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ROBO2	Q9HCK4	1378 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	MYO5B	Q9ULV0	1848 aa		10.09	□□□□□ -0.79
CEACAM1-208	ENST00000403461	NHSL1	Q5SYE7	1610 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	NRXN3	Q9Y4C0	1643 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	MAGEB6P1	A0A0J9YX57	407 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	C4orf48	Q5BLP8	95 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	ESCO1	Q5FWF5	840 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	RC3H1	Q5TC82	1133 aa	Known RBP	10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	ADAM32	Q8TC27	787 aa		10.08	□□□□□ -0.8
CEACAM1-208	ENST00000403461	VARS	P26640	1264 aa	Known RBP	10.07	□□□□□ -0.8
CEACAM1-208	ENST00000403461	CARD14	Q9BXL6	1004 aa		10.07	□□□□□ -0.8
CEACAM1-208	ENST00000403461	NEXMIF	Q5QGS0	1516 aa		10.07	□□□□□ -0.8
CEACAM1-208	ENST00000403461	ATRN	O75882	1429 aa		10.07	□□□□□ -0.8
CEACAM1-208	ENST00000403461	WNT7A	O00755	349 aa		10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	SOX11	P35716	441 aa		10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	EHBP1	Q8NDI1	1231 aa		10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	C1QTNF2	Q9BXJ5	285 aa		10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	PRAG1	Q86YV5	1406 aa		10.06	□□□□□ -0.8
CEACAM1-208	ENST00000403461	POM121C	A8CG34	1229 aa		10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	MCCD1	P59942	119 aa	Predicted RBP	10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	SF3B2	Q13435	895 aa	Known RBP	10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	ERFE	Q4G0M1	354 aa		10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	FAM174A	Q8TBP5	190 aa		10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	ZNF592	Q92610	1267 aa		10.05	□□□□□ -0.8
CEACAM1-208	ENST00000403461	FOXO3	O43524	673 aa		10.04	□□□□□ -0.8
CEACAM1-208	ENST00000403461	TRMT44	Q8IYL2	757 aa	Known RBP	10.04	□□□□□ -0.8
CEACAM1-208	ENST00000403461	SPHKAP	Q2M3C7	1700 aa		10.04	□□□□□ -0.8
CEACAM1-208	ENST00000403461	MYOM2	P54296	1465 aa		10.04	□□□□□ -0.8
CEACAM1-208	ENST00000403461	TTC24	A2A3L6	582 aa	Predicted RBP	10.03	□□□□□ -0.8
CEACAM1-208	ENST00000403461	TOR4A	Q9NXH8	423 aa		10.03	□□□□□ -0.8
CEACAM1-208	ENST00000403461	PCDHB9	Q9Y5E1	797 aa		10.03	□□□□□ -0.8
CEACAM1-208	ENST00000403461	CLTCL1	P53675	1640 aa		10.03	□□□□□ -0.8
CEACAM1-208	ENST00000403461	NALCN	Q8IZF0	1738 aa		10.02	□□□□□ -0.8
CEACAM1-208	ENST00000403461	AXIN1	O15169	862 aa		10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	XPC	Q01831	940 aa	Predicted RBP	10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	SEMA3F	Q13275	785 aa		10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	DZIP3	Q86Y13	1208 aa	Known RBP	10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	UNC5CL	Q8IV45	518 aa		10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	MRGPRX2	Q96LB1	330 aa		10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ALG2	Q9H553	416 aa		10.02	□□□□□ -0.81
CEACAM1-208	ENST00000403461	LAMC1	P11047	1609 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	SIAH2	O43255	324 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	HDGFL1	Q5TGJ6	251 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	SLC10A4	Q96EP9	437 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	STK26	Q9P289	416 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CDV3	Q9UKY7	258 aa	Known RBP	10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	BCL9L	Q86UU0	1499 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CDC42BPG	Q6DT37	1551 aa		10.01	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CCDC144A	A2RUR9	1427 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	BLM	P54132	1417 aa	Predicted RBP	10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	NAIP	Q13075	1403 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	PSME1	Q06323	249 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	MPND	Q8N594	471 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	GLMN	Q92990	594 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	DACH1	Q9UI36	760 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ANKRD30B	Q9BXX2	1392 aa		10	□□□□□ -0.81
CEACAM1-208	ENST00000403461	PXDN	Q92626	1479 aa		9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CRIPAK	Q8N1N5	446 aa		9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ADAMTS19	Q8TE59	1207 aa		9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CALR3	Q96L12	384 aa	Known RBP	9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CCDC9	Q9Y3X0	531 aa	Known RBP	9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	COL22A1	Q8NFW1	1626 aa	Predicted RBP	9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	RRBP1	Q9P2E9	1410 aa	Known RBP	9.99	□□□□□ -0.81
CEACAM1-208	ENST00000403461	AVP	P01185	164 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CTC1	Q2NKJ3	1217 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	WAPL	Q7Z5K2	1190 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CDK15	Q96Q40	435 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	MAP4K5	Q9Y4K4	846 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	SPATA31A3	Q5VYP0	1347 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ABCC11	Q96J66	1382 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	TECPR2	O15040	1411 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	RALGAPB	Q86X10	1494 aa		9.98	□□□□□ -0.81
CEACAM1-208	ENST00000403461	C11orf95	C9JLR9	678 aa	Predicted RBP	9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	NBPF20	Q3BBV1	942 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	RGL3	Q3MIN7	710 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	KRT28	Q7Z3Y7	464 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	SEPT12	Q8IYM1	358 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	CEP126	Q9P2H0	1117 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ADGRF5	Q8IZF2	1346 aa		9.97	□□□□□ -0.81
CEACAM1-208	ENST00000403461	ARID5B	Q14865	1188 aa		9.96	□□□□□ -0.82
CEACAM1-208	ENST00000403461	VPS72	Q15906	364 aa		9.96	□□□□□ -0.82
CEACAM1-208	ENST00000403461	TREML4	Q6UXN2	200 aa		9.96	□□□□□ -0.82
CEACAM1-208	ENST00000403461	VASH1	Q7L8A9	365 aa	Predicted RBP	9.96	□□□□□ -0.82
CEACAM1-208	ENST00000403461	GMPR2	Q9P2T1	348 aa	Known RBP	9.96	□□□□□ -0.82

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