RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 SYNE3Q6ZMZ3 975 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 MTMR7Q9Y216 660 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 ANKRD13DQ6ZTN6 518 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 RASSF8Q8NHQ8 419 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 CCDC158Q5M9N0 1113 aa22.06■■□□□ 1.12
GAREM2-201ENST00000401533 KIF6Q6ZMV9 814 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 PKP1Q13835 747 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.05■■□□□ 1.12
GAREM2-201ENST00000401533 ARHGEF40Q8TER5 1519 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 CLTCQ00610 1675 aaKnown RBP22.05■■□□□ 1.12
GAREM2-201ENST00000401533 ZSCAN23Q3MJ62 389 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 AKAP4Q5JQC9 854 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 CCDC39Q9UFE4 941 aa22.05■■□□□ 1.12
GAREM2-201ENST00000401533 GRM8O00222 908 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 RAB11FIP4Q86YS3 637 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 AGLP35573 1532 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 VSIG10Q8N0Z9 540 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 IP6K1Q92551 441 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 SPATA32Q96LK8 384 aa22.04■■□□□ 1.12
GAREM2-201ENST00000401533 GOLIM4O00461 696 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 GJB2P29033 226 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 KSR2Q6VAB6 950 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 TRIM29Q14134 588 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 IFNL2Q8IZJ0 200 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 IDH1O75874 414 aaKnown RBP22.03■■□□□ 1.12
GAREM2-201ENST00000401533 TPM4P67936 248 aa22.03■■□□□ 1.12
GAREM2-201ENST00000401533 CCT2P78371 535 aaKnown RBP22.03■■□□□ 1.12
GAREM2-201ENST00000401533 ME1P48163 572 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 CKAP2LQ8IYA6 745 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 USP25Q9UHP3 1055 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 NDUFB9Q9Y6M9 179 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 NUTM2BA6NNL0 878 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 NUTM2EB1AL46 878 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 AKAP17AQ02040 695 aaKnown RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 NUTM2AQ8IVF1 878 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-201ENST00000401533 TNMDQ9H2S6 317 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 STX6O43752 255 aa22.02■■□□□ 1.12
GAREM2-201ENST00000401533 USP44Q9H0E7 712 aa22.02■■□□□ 1.11
GAREM2-201ENST00000401533 SBNO1A3KN83 1393 aa22.01■■□□□ 1.11
GAREM2-201ENST00000401533 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
GAREM2-201ENST00000401533 RTL1A6NKG5 1358 aa22.01■■□□□ 1.11
GAREM2-201ENST00000401533 HSPA2P54652 639 aa22.01■■□□□ 1.11
GAREM2-201ENST00000401533 EVI5LQ96CN4 794 aa22.01■■□□□ 1.11
GAREM2-201ENST00000401533 CNPY2Q9Y2B0 182 aa22.01■■□□□ 1.11
GAREM2-201ENST00000401533 HAND2P61296 217 aa22■■□□□ 1.11
GAREM2-201ENST00000401533 ZSCAN31Q96LW9 406 aaPredicted RBP22■■□□□ 1.11
GAREM2-201ENST00000401533 CD163L1Q9NR16 1453 aa22■■□□□ 1.11
GAREM2-201ENST00000401533 IFIT1P09914 478 aaKnown RBP22■■□□□ 1.11
GAREM2-201ENST00000401533 LMBR1LQ6UX01 489 aa22■■□□□ 1.11
GAREM2-201ENST00000401533 RBM8AQ9Y5S9 174 aaKnown RBP22■■□□□ 1.11
GAREM2-201ENST00000401533 ZNF853P0CG23 659 aa21.99■■□□□ 1.11
GAREM2-201ENST00000401533 ANKRD1Q15327 319 aa21.99■■□□□ 1.11
GAREM2-201ENST00000401533 ZSCAN30Q86W11 494 aa21.99■■□□□ 1.11
GAREM2-201ENST00000401533 USP32Q8NFA0 1604 aa21.99■■□□□ 1.11
GAREM2-201ENST00000401533 KINO60870 393 aaKnown RBP21.99■■□□□ 1.11
GAREM2-201ENST00000401533 PES1O00541 588 aaKnown RBP21.99■■□□□ 1.11
GAREM2-201ENST00000401533 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
GAREM2-201ENST00000401533 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
GAREM2-201ENST00000401533 AK2P54819 239 aa21.98■■□□□ 1.11
GAREM2-201ENST00000401533 BICC1Q9H694 974 aaKnown RBP21.98■■□□□ 1.11
GAREM2-201ENST00000401533 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
GAREM2-201ENST00000401533 CCDC192P0DO97 292 aa21.98■■□□□ 1.11
GAREM2-201ENST00000401533 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
GAREM2-201ENST00000401533 STK38Q15208 465 aa21.97■■□□□ 1.11
GAREM2-201ENST00000401533 GIMAP6Q6P9H5 292 aa21.97■■□□□ 1.11
GAREM2-201ENST00000401533 LINS1Q8NG48 757 aa21.97■■□□□ 1.11
GAREM2-201ENST00000401533 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
GAREM2-201ENST00000401533 USP48Q86UV5 1035 aa21.97■■□□□ 1.11
GAREM2-201ENST00000401533 TBC1D2BQ9UPU7 963 aa21.97■■□□□ 1.11
GAREM2-201ENST00000401533 METTL24Q5JXM2 366 aa21.96■■□□□ 1.11
GAREM2-201ENST00000401533 NUP62CLQ9H1M0 184 aa21.96■■□□□ 1.11
GAREM2-201ENST00000401533 NMIQ13287 307 aaPredicted RBP21.96■■□□□ 1.11
GAREM2-201ENST00000401533 UNC5CLQ8IV45 518 aa21.96■■□□□ 1.11
GAREM2-201ENST00000401533 CCDC82Q8N4S0 544 aa21.96■■□□□ 1.11
GAREM2-201ENST00000401533 ATP7BP35670 1465 aa21.96■■□□□ 1.11
GAREM2-201ENST00000401533 ANTXR1Q9H6X2 564 aa21.95■■□□□ 1.1
GAREM2-201ENST00000401533 RRAGDQ9NQL2 400 aaPredicted RBP21.95■■□□□ 1.1
GAREM2-201ENST00000401533 ZNF830Q96NB3 372 aaPredicted RBP21.95■■□□□ 1.1
GAREM2-201ENST00000401533 TMOD3Q9NYL9 352 aa21.95■■□□□ 1.1
GAREM2-201ENST00000401533 SPATA31D1Q6ZQQ2 1576 aa21.94■■□□□ 1.1
GAREM2-201ENST00000401533 BICDL1Q6ZP65 573 aa21.94■■□□□ 1.1
GAREM2-201ENST00000401533 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
GAREM2-201ENST00000401533 PNPLA6Q8IY17 1366 aa21.94■■□□□ 1.1
GAREM2-201ENST00000401533 MED14O60244 1454 aa21.94■■□□□ 1.1
GAREM2-201ENST00000401533 FAM173BQ6P4H8 233 aa21.94■■□□□ 1.1
GAREM2-201ENST00000401533 EIF4A1P60842 406 aaKnown RBP21.94■■□□□ 1.1
GAREM2-201ENST00000401533 DNM1Q05193 864 aaKnown RBP21.94■■□□□ 1.1
GAREM2-201ENST00000401533 CHST3Q7LGC8 479 aa21.93■■□□□ 1.1
GAREM2-201ENST00000401533 BRF1Q92994 677 aa21.93■■□□□ 1.1
GAREM2-201ENST00000401533 MPHOSPH8Q99549 860 aa21.93■■□□□ 1.1
GAREM2-201ENST00000401533 PRAMEF22A3QJZ6 481 aa21.93■■□□□ 1.1
GAREM2-201ENST00000401533 ERICH2A1L162 156 aa21.92■■□□□ 1.1
GAREM2-201ENST00000401533 FAM227BQ96M60 508 aa21.92■■□□□ 1.1
GAREM2-201ENST00000401533 HSP90AB3PQ58FF7 597 aa21.92■■□□□ 1.1
GAREM2-201ENST00000401533 KRT32Q14532 448 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1726.7 ms