RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SASS6Q6UVJ0 657 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 CCDC73Q6ZRK6 1079 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 TTC41PQ6P2S7 1318 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 SYCE3A1L190 88 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 TTC39AQ5SRH9 613 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 CCDC34Q96HJ3 373 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 PA2G4Q9UQ80 394 aaKnown RBP7.8□□□□□ -1.16
BDNF-203ENST00000395978 PTCH1Q13635 1447 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 FOSBP53539 338 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
BDNF-203ENST00000395978 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 SPATA31D1Q6ZQQ2 1576 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 STARD3NLO95772 234 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 NBPF7P0C2Y1 421 aaPredicted RBP7.8□□□□□ -1.16
BDNF-203ENST00000395978 FKBP4Q02790 459 aaKnown RBP eCLIP7.8□□□□□ -1.16
BDNF-203ENST00000395978 ZGPATQ8N5A5 531 aaKnown RBP7.8□□□□□ -1.16
BDNF-203ENST00000395978 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
BDNF-203ENST00000395978 CNNM1Q9NRU3 951 aa7.8□□□□□ -1.16
BDNF-203ENST00000395978 TRIM29Q14134 588 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 DHX16O60231 1041 aaKnown RBP7.79□□□□□ -1.16
BDNF-203ENST00000395978 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
BDNF-203ENST00000395978 CABLES1Q8TDN4 633 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 SSH3Q8TE77 659 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 ANTXR1Q9H6X2 564 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 IQSEC2Q5JU85 1478 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 AOX1Q06278 1338 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 PIK3C2BO00750 1634 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 JARID2Q92833 1246 aaPredicted RBP7.79□□□□□ -1.16
BDNF-203ENST00000395978 INTS4Q96HW7 963 aaKnown RBP7.79□□□□□ -1.16
BDNF-203ENST00000395978 TMOD3Q9NYL9 352 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 CTNNA3Q9UI47 895 aa7.79□□□□□ -1.16
BDNF-203ENST00000395978 STX6O43752 255 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 ZNF790Q6PG37 636 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 NFXL1Q6ZNB6 911 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 FERMT3Q86UX7 667 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 DCAF5Q96JK2 942 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.78□□□□□ -1.16
BDNF-203ENST00000395978 ZBTB3Q9H5J0 574 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 FER1L4A9Z1Z3 1794 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 DLC1Q96QB1 1528 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 AKAP17AQ02040 695 aaKnown RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 U3KPZ7 1027 aaPredicted RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 IFIT1P09914 478 aaKnown RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 CCDC192P0DO97 292 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 ZCRB1Q8TBF4 217 aaKnown RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 GDPD2Q9HCC8 539 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 AKAP2Q9Y2D5 859 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 SETD1BQ9UPS6 1966 aaKnown RBP7.78□□□□□ -1.16
BDNF-203ENST00000395978 FAM177BA6PVY3 158 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 KCNQ3O43525 872 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 SDF4Q9BRK5 362 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 PANK2Q9BZ23 570 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
BDNF-203ENST00000395978 LRRC7Q96NW7 1537 aa7.77□□□□□ -1.16
BDNF-203ENST00000395978 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 VPS37DQ86XT2 251 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 ZNF396Q96N95 335 aaPredicted RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 ARID3AQ99856 593 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 RBM8AQ9Y5S9 174 aaKnown RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 ZSCAN23Q3MJ62 389 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 LMBR1LQ6UX01 489 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 SPATA32Q96LK8 384 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 HMG20BQ9P0W2 317 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 SGSM2O43147 1006 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 GJB2P29033 226 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 HSP90AA2PQ14568 343 aaPredicted RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 ZSCAN25Q6NSZ9 544 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 ARHGEF25Q86VW2 580 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 BICC1Q9H694 974 aaKnown RBP7.77□□□□□ -1.17
BDNF-203ENST00000395978 CFAP45Q9UL16 551 aa7.77□□□□□ -1.17
BDNF-203ENST00000395978 RIMS1Q86UR5 1692 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 ERICH2A1L162 156 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 CEBPZQ03701 1054 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 CCDC183Q5T5S1 534 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 DDX11Q96FC9 970 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 TEX13AQ9BXU3 409 aaPredicted RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 SCAND2PQ9GZW5 306 aaPredicted RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 TNMDQ9H2S6 317 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 IBTKQ9P2D0 1353 aaPredicted RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 MROH2AA6NES4 1674 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 EPB41L2O43491 1005 aaKnown RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 ZSCAN22P10073 491 aaPredicted RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 SAFBQ15424 915 aaKnown RBP eCLIP7.76□□□□□ -1.17
BDNF-203ENST00000395978 METTL24Q5JXM2 366 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 BEND3Q5T5X7 828 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.76□□□□□ -1.17
BDNF-203ENST00000395978 GOLIM4O00461 696 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 TPM3P06753 285 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 NUP62CLQ9H1M0 184 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
BDNF-203ENST00000395978 STAP2Q9UGK3 403 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms