RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.13■■□□□ 1.93
CBWD3-202ENST00000377342 PI4KAP2A4QPH2 592 aa27.13■■□□□ 1.93
CBWD3-202ENST00000377342 IPO8O15397 1037 aaKnown RBP27.13■■□□□ 1.93
CBWD3-202ENST00000377342 SSFA2P28290 1259 aa27.13■■□□□ 1.93
CBWD3-202ENST00000377342 DZIP3Q86Y13 1208 aaKnown RBP27.13■■□□□ 1.93
CBWD3-202ENST00000377342 PI4KAP1Q8N8J0 262 aa27.13■■□□□ 1.93
CBWD3-202ENST00000377342 TBC1D2BQ9UPU7 963 aa27.13■■□□□ 1.93
CBWD3-202ENST00000377342 MAP3K15Q6ZN16 1313 aa27.12■■□□□ 1.93
CBWD3-202ENST00000377342 KSR2Q6VAB6 950 aa27.12■■□□□ 1.93
CBWD3-202ENST00000377342 API5Q9BZZ5 524 aaKnown RBP27.12■■□□□ 1.93
CBWD3-202ENST00000377342 ZBTB3Q9H5J0 574 aa27.12■■□□□ 1.93
CBWD3-202ENST00000377342 RLBP1P12271 317 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 ADRA2BP18089 450 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 SLC15A2Q16348 729 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 C20orf194Q5TEA3 1177 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 ANKRD13DQ6ZTN6 518 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.11■■□□□ 1.93
CBWD3-202ENST00000377342 PLBD2Q8NHP8 589 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 PNPLA7Q6ZV29 1317 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 CAMTA2O94983 1202 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 DDX58O95786 925 aaKnown RBP27.11■■□□□ 1.93
CBWD3-202ENST00000377342 KIF6Q6ZMV9 814 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 ARHGEF1Q92888 912 aaKnown RBP27.11■■□□□ 1.93
CBWD3-202ENST00000377342 CLUAP1Q96AJ1 413 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 TFCP2L1Q9NZI6 479 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 MAP3K2Q9Y2U5 619 aa27.11■■□□□ 1.93
CBWD3-202ENST00000377342 A0A087WZG4 1122 aa27.09■■□□□ 1.93
CBWD3-202ENST00000377342 DNAAF4Q8WXU2 420 aa27.09■■□□□ 1.93
CBWD3-202ENST00000377342 STK32BQ9NY57 414 aa27.09■■□□□ 1.93
CBWD3-202ENST00000377342 ATP10DQ9P241 1426 aa27.09■■□□□ 1.93
CBWD3-202ENST00000377342 TRAPPC3LQ5T215 181 aa27.08■■□□□ 1.93
CBWD3-202ENST00000377342 NPM2Q86SE8 214 aaKnown RBP27.08■■□□□ 1.93
CBWD3-202ENST00000377342 USP42Q9H9J4 1324 aaKnown RBP27.08■■□□□ 1.93
CBWD3-202ENST00000377342 HLFQ16534 295 aa27.08■■□□□ 1.92
CBWD3-202ENST00000377342 RIC3Q7Z5B4 369 aa27.08■■□□□ 1.92
CBWD3-202ENST00000377342 PANK1Q8TE04 598 aa27.08■■□□□ 1.92
CBWD3-202ENST00000377342 ARXQ96QS3 562 aa27.08■■□□□ 1.92
CBWD3-202ENST00000377342 SRP68Q9UHB9 627 aaKnown RBP27.08■■□□□ 1.92
CBWD3-202ENST00000377342 NARFQ9UHQ1 456 aa27.08■■□□□ 1.92
CBWD3-202ENST00000377342 DZIP1LQ8IYY4 767 aaKnown RBP27.07■■□□□ 1.92
CBWD3-202ENST00000377342 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
CBWD3-202ENST00000377342 CASZ1Q86V15 1759 aa27.07■■□□□ 1.92
CBWD3-202ENST00000377342 ERVV-1B6SEH8 477 aa27.06■■□□□ 1.92
CBWD3-202ENST00000377342 COL23A1Q86Y22 540 aaPredicted RBP27.06■■□□□ 1.92
CBWD3-202ENST00000377342 BCL2L12Q9HB09 334 aa27.06■■□□□ 1.92
CBWD3-202ENST00000377342 PDE3AQ14432 1141 aa27.05■■□□□ 1.92
CBWD3-202ENST00000377342 GIGYF2Q6Y7W6 1299 aaKnown RBP27.05■■□□□ 1.92
CBWD3-202ENST00000377342 FTSJ3Q8IY81 847 aaKnown RBP27.05■■□□□ 1.92
CBWD3-202ENST00000377342 METTL22Q9BUU2 404 aaPredicted RBP27.05■■□□□ 1.92
CBWD3-202ENST00000377342 RFC4P35249 363 aa27.04■■□□□ 1.92
CBWD3-202ENST00000377342 USPL1Q5W0Q7 1092 aa27.04■■□□□ 1.92
CBWD3-202ENST00000377342 SLC4A10Q6U841 1118 aa27.04■■□□□ 1.92
CBWD3-202ENST00000377342 TMEM57Q8N5G2 664 aa27.04■■□□□ 1.92
CBWD3-202ENST00000377342 BEND3Q5T5X7 828 aa27.03■■□□□ 1.92
CBWD3-202ENST00000377342 MYD88Q99836 296 aa27.02■■□□□ 1.92
CBWD3-202ENST00000377342 RGL2O15211 777 aa27.01■■□□□ 1.92
CBWD3-202ENST00000377342 IGKV5-2P06315 115 aa27.01■■□□□ 1.92
CBWD3-202ENST00000377342 INTS3Q68E01 1043 aaKnown RBP27.01■■□□□ 1.92
CBWD3-202ENST00000377342 FLAD1Q8NFF5 587 aa27.01■■□□□ 1.92
CBWD3-202ENST00000377342 ZPR1O75312 459 aa27■■□□□ 1.91
CBWD3-202ENST00000377342 MS4A1P11836 297 aa27■■□□□ 1.91
CBWD3-202ENST00000377342 GYS1P13807 737 aa26.99■■□□□ 1.91
CBWD3-202ENST00000377342 IRX6P78412 446 aaPredicted RBP26.99■■□□□ 1.91
CBWD3-202ENST00000377342 TCIRG1Q13488 830 aa26.99■■□□□ 1.91
CBWD3-202ENST00000377342 CWF19L2Q2TBE0 894 aaKnown RBP26.99■■□□□ 1.91
CBWD3-202ENST00000377342 ISCA1Q9BUE6 129 aa26.99■■□□□ 1.91
CBWD3-202ENST00000377342 CCT4P50991 539 aaKnown RBP26.98■■□□□ 1.91
CBWD3-202ENST00000377342 LINS1Q8NG48 757 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 PDGFDQ9GZP0 370 aaPredicted RBP26.98■■□□□ 1.91
CBWD3-202ENST00000377342 COG6Q9Y2V7 657 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 UBN2Q6ZU65 1347 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 ATP5J2-PTCD1G3V325 749 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 CLEC4GQ6UXB4 293 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 ZNF652Q9Y2D9 606 aa26.98■■□□□ 1.91
CBWD3-202ENST00000377342 NEURL1BA8MQ27 555 aa26.97■■□□□ 1.91
CBWD3-202ENST00000377342 MVPQ14764 893 aaKnown RBP26.97■■□□□ 1.91
CBWD3-202ENST00000377342 ZNF34Q8IZ26 560 aa26.97■■□□□ 1.91
CBWD3-202ENST00000377342 SRCIN1Q9C0H9 1055 aa26.97■■□□□ 1.91
CBWD3-202ENST00000377342 IBTKQ9P2D0 1353 aaPredicted RBP26.96■■□□□ 1.91
CBWD3-202ENST00000377342 NEXNQ0ZGT2 675 aa26.96■■□□□ 1.91
CBWD3-202ENST00000377342 FKBP8Q14318 412 aa26.96■■□□□ 1.91
CBWD3-202ENST00000377342 HSP90AB3PQ58FF7 597 aa26.96■■□□□ 1.91
CBWD3-202ENST00000377342 ITPRIPQ8IWB1 547 aa26.96■■□□□ 1.91
CBWD3-202ENST00000377342 GPTP24298 496 aa26.95■■□□□ 1.91
CBWD3-202ENST00000377342 CRBNQ96SW2 442 aa26.95■■□□□ 1.91
CBWD3-202ENST00000377342 TBC1D9BQ66K14 1250 aa26.95■■□□□ 1.9
CBWD3-202ENST00000377342 MSH5O43196 834 aa26.94■■□□□ 1.9
CBWD3-202ENST00000377342 ALDH1L1O75891 902 aa26.94■■□□□ 1.9
CBWD3-202ENST00000377342 TRIM28Q13263 835 aaKnown RBP26.93■■□□□ 1.9
CBWD3-202ENST00000377342 LAMB2P55268 1798 aa26.93■■□□□ 1.9
CBWD3-202ENST00000377342 R3HDM1Q15032 1099 aaKnown RBP26.92■■□□□ 1.9
CBWD3-202ENST00000377342 NLRP10Q86W26 655 aa26.92■■□□□ 1.9
CBWD3-202ENST00000377342 NIP7Q9Y221 180 aaKnown RBP eCLIP26.92■■□□□ 1.9
CBWD3-202ENST00000377342 GCKRQ14397 625 aa26.92■■□□□ 1.9
CBWD3-202ENST00000377342 CCDC191Q8NCU4 936 aa26.92■■□□□ 1.9
CBWD3-202ENST00000377342 NRXN2Q9P2S2 1712 aa26.92■■□□□ 1.9
CBWD3-202ENST00000377342 NFIXQ14938 502 aa26.9■■□□□ 1.9
CBWD3-202ENST00000377342 CWC25Q9NXE8 425 aaPredicted RBP26.9■■□□□ 1.9
CBWD3-202ENST00000377342 DDX60Q8IY21 1712 aaKnown RBP26.9■■□□□ 1.9
CBWD3-202ENST00000377342 BICDL1Q6ZP65 573 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms