RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 IL17REQ8NFR9 667 aa18.58■□□□□ 0.57
FXN-201ENST00000377270 STK31Q9BXU1 1019 aa18.58■□□□□ 0.57
FXN-201ENST00000377270 CLSTN1O94985 981 aa18.58■□□□□ 0.56
FXN-201ENST00000377270 PSME1Q06323 249 aa18.58■□□□□ 0.56
FXN-201ENST00000377270 MCTP1Q6DN14 999 aa18.58■□□□□ 0.56
FXN-201ENST00000377270 RNF217Q8TC41 542 aa18.58■□□□□ 0.56
FXN-201ENST00000377270 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.56
FXN-201ENST00000377270 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
FXN-201ENST00000377270 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
FXN-201ENST00000377270 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.57■□□□□ 0.56
FXN-201ENST00000377270 CHD2O14647 1828 aaKnown RBP18.57■□□□□ 0.56
FXN-201ENST00000377270 APBB1O00213 710 aa18.56■□□□□ 0.56
FXN-201ENST00000377270 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
FXN-201ENST00000377270 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
FXN-201ENST00000377270 HNRNPH2P55795 449 aaKnown RBP18.56■□□□□ 0.56
FXN-201ENST00000377270 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
FXN-201ENST00000377270 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
FXN-201ENST00000377270 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
FXN-201ENST00000377270 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
FXN-201ENST00000377270 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
FXN-201ENST00000377270 RASSF4Q9H2L5 321 aa18.55■□□□□ 0.56
FXN-201ENST00000377270 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
FXN-201ENST00000377270 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
FXN-201ENST00000377270 IP6K1Q92551 441 aa18.55■□□□□ 0.56
FXN-201ENST00000377270 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
FXN-201ENST00000377270 CDC45O75419 566 aa18.54■□□□□ 0.56
FXN-201ENST00000377270 SMARCA5O60264 1052 aaPredicted RBP18.54■□□□□ 0.56
FXN-201ENST00000377270 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
FXN-201ENST00000377270 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
FXN-201ENST00000377270 NUCB2P80303 420 aa18.53■□□□□ 0.56
FXN-201ENST00000377270 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.56
FXN-201ENST00000377270 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
FXN-201ENST00000377270 FLIIQ13045 1269 aa18.53■□□□□ 0.56
FXN-201ENST00000377270 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
FXN-201ENST00000377270 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
FXN-201ENST00000377270 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
FXN-201ENST00000377270 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
FXN-201ENST00000377270 MORC2Q9Y6X9 1032 aaPredicted RBP18.53■□□□□ 0.56
FXN-201ENST00000377270 HMMRO75330 724 aa18.52■□□□□ 0.56
FXN-201ENST00000377270 GYS2P54840 703 aa18.52■□□□□ 0.56
FXN-201ENST00000377270 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
FXN-201ENST00000377270 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.56
FXN-201ENST00000377270 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
FXN-201ENST00000377270 MAP2K1Q02750 393 aaPredicted RBP18.52■□□□□ 0.55
FXN-201ENST00000377270 PIBF1Q8WXW3 757 aa18.52■□□□□ 0.55
FXN-201ENST00000377270 BRMS1Q9HCU9 246 aa18.51■□□□□ 0.55
FXN-201ENST00000377270 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
FXN-201ENST00000377270 TNNT1P13805 278 aa18.51■□□□□ 0.55
FXN-201ENST00000377270 DNAJC21Q5F1R6 531 aaKnown RBP18.51■□□□□ 0.55
FXN-201ENST00000377270 ADGRL3Q9HAR2 1447 aa18.5■□□□□ 0.55
FXN-201ENST00000377270 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
FXN-201ENST00000377270 GNAI2P04899 355 aa18.5■□□□□ 0.55
FXN-201ENST00000377270 CYP2E1P05181 493 aaPredicted RBP18.5■□□□□ 0.55
FXN-201ENST00000377270 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
FXN-201ENST00000377270 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
FXN-201ENST00000377270 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
FXN-201ENST00000377270 SGSM3Q96HU1 749 aa18.49■□□□□ 0.55
FXN-201ENST00000377270 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
FXN-201ENST00000377270 LTN1O94822 1766 aa18.49■□□□□ 0.55
FXN-201ENST00000377270 C17orf53Q8N3J3 647 aaPredicted RBP18.49■□□□□ 0.55
FXN-201ENST00000377270 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
FXN-201ENST00000377270 DONSONQ9NYP3 566 aa18.49■□□□□ 0.55
FXN-201ENST00000377270 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
FXN-201ENST00000377270 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
FXN-201ENST00000377270 CTIFO43310 598 aaKnown RBP18.48■□□□□ 0.55
FXN-201ENST00000377270 PRPF40AO75400 957 aaKnown RBP18.48■□□□□ 0.55
FXN-201ENST00000377270 KRT222Q8N1A0 295 aa18.48■□□□□ 0.55
FXN-201ENST00000377270 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
FXN-201ENST00000377270 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
FXN-201ENST00000377270 LGR6Q9HBX8 967 aa18.47■□□□□ 0.55
FXN-201ENST00000377270 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
FXN-201ENST00000377270 NFAT5O94916 1531 aa18.47■□□□□ 0.55
FXN-201ENST00000377270 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
FXN-201ENST00000377270 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
FXN-201ENST00000377270 GNAI3P08754 354 aa18.46■□□□□ 0.55
FXN-201ENST00000377270 SDSP20132 328 aa18.46■□□□□ 0.55
FXN-201ENST00000377270 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
FXN-201ENST00000377270 SYCE3A1L190 88 aa18.46■□□□□ 0.55
FXN-201ENST00000377270 NCBP1Q09161 790 aaKnown RBP18.46■□□□□ 0.55
FXN-201ENST00000377270 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
FXN-201ENST00000377270 DIAPH3Q9NSV4 1193 aa18.45■□□□□ 0.54
FXN-201ENST00000377270 TMEM63CQ9P1W3 806 aa18.45■□□□□ 0.54
FXN-201ENST00000377270 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
FXN-201ENST00000377270 GCP02774 474 aa18.45■□□□□ 0.54
FXN-201ENST00000377270 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
FXN-201ENST00000377270 TDO2P48775 406 aa18.44■□□□□ 0.54
FXN-201ENST00000377270 KIF18AQ8NI77 898 aa18.44■□□□□ 0.54
FXN-201ENST00000377270 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
FXN-201ENST00000377270 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
FXN-201ENST00000377270 CASQ1P31415 396 aa18.44■□□□□ 0.54
FXN-201ENST00000377270 CYP2C19P33261 490 aa18.43■□□□□ 0.54
FXN-201ENST00000377270 RABEP1Q15276 862 aa18.43■□□□□ 0.54
FXN-201ENST00000377270 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
FXN-201ENST00000377270 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
FXN-201ENST00000377270 PKP1Q13835 747 aa18.43■□□□□ 0.54
FXN-201ENST00000377270 C10orf67Q8IYJ2 551 aa18.43■□□□□ 0.54
FXN-201ENST00000377270 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 CHAF1AQ13111 956 aaPredicted RBP18.42■□□□□ 0.54
FXN-201ENST00000377270 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms