RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
MSH5-201ENST00000375703 LTN1O94822 1766 aa17.51■□□□□ 0.39
MSH5-201ENST00000375703 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
MSH5-201ENST00000375703 GIGYF1O75420 1035 aaPredicted RBP17.5■□□□□ 0.39
MSH5-201ENST00000375703 GPATCH3Q96I76 525 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
MSH5-201ENST00000375703 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
MSH5-201ENST00000375703 STX6O43752 255 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 CPA1P15085 419 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 SYT1P21579 422 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
MSH5-201ENST00000375703 PTH1RQ03431 593 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 CNPY2Q9Y2B0 182 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 ZKSCAN5Q9Y2L8 839 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 NFAT5O94916 1531 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 HSP90AA2PQ14568 343 aaPredicted RBP17.49■□□□□ 0.39
MSH5-201ENST00000375703 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
MSH5-201ENST00000375703 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
MSH5-201ENST00000375703 GCP02774 474 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 MCM5P33992 734 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 PRPF40BQ6NWY9 871 aaKnown RBP17.48■□□□□ 0.39
MSH5-201ENST00000375703 ANKLE2Q86XL3 938 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
MSH5-201ENST00000375703 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
MSH5-201ENST00000375703 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 RRP9O43818 475 aaKnown RBP17.47■□□□□ 0.39
MSH5-201ENST00000375703 VPS53Q5VIR6 699 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 AACSQ86V21 672 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 FER1L4A9Z1Z3 1794 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
MSH5-201ENST00000375703 F13A1P00488 732 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
MSH5-201ENST00000375703 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 LARGE1O95461 756 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
MSH5-201ENST00000375703 CCDC183Q5T5S1 534 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 LINS1Q8NG48 757 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 ANKRD24Q8TF21 1146 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
MSH5-201ENST00000375703 TM6SF1Q9BZW5 370 aa17.46■□□□□ 0.39
MSH5-201ENST00000375703 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
MSH5-201ENST00000375703 UBE2HP62256 183 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 GRM8O00222 908 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
MSH5-201ENST00000375703 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
MSH5-201ENST00000375703 GJB2P29033 226 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
MSH5-201ENST00000375703 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 KCNB2Q92953 911 aa17.45■□□□□ 0.38
MSH5-201ENST00000375703 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
MSH5-201ENST00000375703 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 SUCLG2Q96I99 432 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 SH2B1Q9NRF2 756 aaPredicted RBP17.44■□□□□ 0.38
MSH5-201ENST00000375703 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
MSH5-201ENST00000375703 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 SASH1O94885 1247 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 TERF1P54274 439 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
MSH5-201ENST00000375703 KCNJ4P48050 445 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 CCDC8Q9H0W5 538 aaPredicted RBP17.43■□□□□ 0.38
MSH5-201ENST00000375703 BICC1Q9H694 974 aaKnown RBP17.43■□□□□ 0.38
MSH5-201ENST00000375703 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 HIP1O00291 1037 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 FIBPO43427 364 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 EAF2Q96CJ1 260 aaPredicted RBP17.43■□□□□ 0.38
MSH5-201ENST00000375703 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
MSH5-201ENST00000375703 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
MSH5-201ENST00000375703 CSPP1Q1MSJ5 1256 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
MSH5-201ENST00000375703 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 RBM8AQ9Y5S9 174 aaKnown RBP17.42■□□□□ 0.38
MSH5-201ENST00000375703 RGPD2P0DJD1 1756 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 DTNBO60941 627 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 PXDNQ92626 1479 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 FAM227BQ96M60 508 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
MSH5-201ENST00000375703 UTYO14607 1347 aa17.42■□□□□ 0.38
MSH5-201ENST00000375703 CREB3L3Q68CJ9 461 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 NMIQ13287 307 aaPredicted RBP17.41■□□□□ 0.38
MSH5-201ENST00000375703 ME3Q16798 604 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms