RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 NGLY1Q96IV0 654 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 PCDHB15Q9Y5E8 787 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 KRT32Q14532 448 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 NACAP1Q9BZK3 213 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 EPB41L2O43491 1005 aaKnown RBP14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 MAP4K4O95819 1239 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 ARHGAP29Q52LW3 1261 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 LRRFIP2Q9Y608 721 aaKnown RBP14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 SF3B2Q13435 895 aaKnown RBP14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 TAX1BP1Q86VP1 789 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 ARAP3Q8WWN8 1544 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 ERVK-7P63135 1459 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 PTPRTO14522 1441 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 PLXNC1O60486 1568 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 HECW2Q9P2P5 1572 aa14.35□□□□□ -0.11
NPLOC4-202ENST00000374747 HSPA2P54652 639 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 TOM1O60784 492 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 INCENPQ9NQS7 918 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 INSRP06213 1382 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 SNRPA1P09661 255 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 MX1P20591 662 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 GLRX3O76003 335 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 GCP02774 474 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
NPLOC4-202ENST00000374747 MADDQ8WXG6 1647 aa14.33□□□□□ -0.11
NPLOC4-202ENST00000374747 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.11
NPLOC4-202ENST00000374747 CFAP100Q494V2 611 aa14.33□□□□□ -0.11
NPLOC4-202ENST00000374747 ANKRD62A6NC57 917 aa14.33□□□□□ -0.12
NPLOC4-202ENST00000374747 CCDC148Q8NFR7 591 aa14.33□□□□□ -0.12
NPLOC4-202ENST00000374747 ZCRB1Q8TBF4 217 aaKnown RBP14.33□□□□□ -0.12
NPLOC4-202ENST00000374747 CRACR2AQ9BSW2 395 aa14.33□□□□□ -0.12
NPLOC4-202ENST00000374747 AKAP2Q9Y2D5 859 aa14.33□□□□□ -0.12
NPLOC4-202ENST00000374747 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 MAP3K19Q56UN5 1328 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 KIF18AQ8NI77 898 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 IP6K1Q92551 441 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 USP19O94966 1318 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 MTHFSDQ2M296 383 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 KIAA1328Q86T90 577 aa14.32□□□□□ -0.12
NPLOC4-202ENST00000374747 CBX1P83916 185 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 HOXC9P31274 260 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 EYA1Q99502 592 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 SHTN1A0MZ66 631 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 FKBP4Q02790 459 aaKnown RBP eCLIP14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 STK11IPQ8N1F8 1099 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 MAP3K2Q9Y2U5 619 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 MYOM2P54296 1465 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 EZRP15311 586 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 TAF4BQ92750 862 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
NPLOC4-202ENST00000374747 EIF5P55010 431 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 CGNQ9P2M7 1197 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 CAMK4Q16566 473 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 PLEKHG3A1L390 1219 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 A0A087WZG4 1122 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 ZPR1O75312 459 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 METTL24Q5JXM2 366 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 WASF1Q92558 559 aa14.3□□□□□ -0.12
NPLOC4-202ENST00000374747 SBNO1A3KN83 1393 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 BMP2KQ9NSY1 1161 aaPredicted RBP14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 LTKP29376 864 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 PRDM10Q9NQV6 1147 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 ANO10Q9NW15 660 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 BICDL1Q6ZP65 573 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 CALCOCO1Q9P1Z2 691 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 CCDC85AQ96PX6 553 aaPredicted RBP14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 SCAND2PQ9GZW5 306 aaPredicted RBP14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 MAP3K5Q99683 1374 aa14.29□□□□□ -0.12
NPLOC4-202ENST00000374747 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 LAMC1P11047 1609 aa14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms