RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PTPRCP08575 1304 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 ARFGEF2Q9Y6D5 1785 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 PI4KAP2A4QPH2 592 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
CHGA-202ENST00000334654 FKBP5Q13451 457 aaPredicted RBP22.34■■□□□ 1.17
CHGA-202ENST00000334654 HLFQ16534 295 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 KSR2Q6VAB6 950 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 PI4KAP1Q8N8J0 262 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 PLBD2Q8NHP8 589 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 ARHGAP45Q92619 1136 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 PDGFDQ9GZP0 370 aaPredicted RBP22.34■■□□□ 1.17
CHGA-202ENST00000334654 ZBTB3Q9H5J0 574 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 USP42Q9H9J4 1324 aaKnown RBP22.33■■□□□ 1.17
CHGA-202ENST00000334654 SCN7AQ01118 1682 aa22.33■■□□□ 1.17
CHGA-202ENST00000334654 ERVV-1B6SEH8 477 aa22.33■■□□□ 1.16
CHGA-202ENST00000334654 RFC4P35249 363 aa22.33■■□□□ 1.16
CHGA-202ENST00000334654 USPL1Q5W0Q7 1092 aa22.32■■□□□ 1.16
CHGA-202ENST00000334654 NPM2Q86SE8 214 aaKnown RBP22.32■■□□□ 1.16
CHGA-202ENST00000334654 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
CHGA-202ENST00000334654 ARXQ96QS3 562 aa22.32■■□□□ 1.16
CHGA-202ENST00000334654 RNF123Q5XPI4 1314 aa22.32■■□□□ 1.16
CHGA-202ENST00000334654 F6X3S4 739 aa22.31■■□□□ 1.16
CHGA-202ENST00000334654 PLIN1O60240 522 aa22.31■■□□□ 1.16
CHGA-202ENST00000334654 GIGYF2Q6Y7W6 1299 aaKnown RBP22.31■■□□□ 1.16
CHGA-202ENST00000334654 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
CHGA-202ENST00000334654 DDX58O95786 925 aaKnown RBP22.3■■□□□ 1.16
CHGA-202ENST00000334654 TRIM27P14373 513 aa22.3■■□□□ 1.16
CHGA-202ENST00000334654 R3HDM1Q15032 1099 aaKnown RBP22.3■■□□□ 1.16
CHGA-202ENST00000334654 MAP3K2Q9Y2U5 619 aa22.3■■□□□ 1.16
CHGA-202ENST00000334654 RGL2O15211 777 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 IPO8O15397 1037 aaKnown RBP22.29■■□□□ 1.16
CHGA-202ENST00000334654 GYS1P13807 737 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 CASZ1Q86V15 1759 aa22.29■■□□□ 1.16
CHGA-202ENST00000334654 ZPR1O75312 459 aa22.28■■□□□ 1.16
CHGA-202ENST00000334654 DNAAF4Q8WXU2 420 aa22.28■■□□□ 1.16
CHGA-202ENST00000334654 CLEC4GQ6UXB4 293 aa22.28■■□□□ 1.16
CHGA-202ENST00000334654 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
CHGA-202ENST00000334654 API5Q9BZZ5 524 aaKnown RBP22.28■■□□□ 1.16
CHGA-202ENST00000334654 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
CHGA-202ENST00000334654 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
CHGA-202ENST00000334654 FKBP8Q14318 412 aa22.27■■□□□ 1.16
CHGA-202ENST00000334654 ANKRD36CQ5JPF3 1778 aa22.27■■□□□ 1.15
CHGA-202ENST00000334654 ABCC4O15439 1325 aa22.26■■□□□ 1.15
CHGA-202ENST00000334654 MSH5O43196 834 aa22.26■■□□□ 1.15
CHGA-202ENST00000334654 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
CHGA-202ENST00000334654 PSDA5PKW4 1024 aaPredicted RBP22.25■■□□□ 1.15
CHGA-202ENST00000334654 IGKV5-2P06315 115 aa22.25■■□□□ 1.15
CHGA-202ENST00000334654 RLBP1P12271 317 aa22.25■■□□□ 1.15
CHGA-202ENST00000334654 BEND3Q5T5X7 828 aa22.25■■□□□ 1.15
CHGA-202ENST00000334654 ZNF34Q8IZ26 560 aa22.25■■□□□ 1.15
CHGA-202ENST00000334654 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
CHGA-202ENST00000334654 ATP10DQ9P241 1426 aa22.24■■□□□ 1.15
CHGA-202ENST00000334654 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
CHGA-202ENST00000334654 MYD88Q99836 296 aa22.24■■□□□ 1.15
CHGA-202ENST00000334654 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
CHGA-202ENST00000334654 N4BP2Q86UW6 1770 aaPredicted RBP22.24■■□□□ 1.15
CHGA-202ENST00000334654 C20orf194Q5TEA3 1177 aa22.23■■□□□ 1.15
CHGA-202ENST00000334654 PXDNLA1KZ92 1463 aa22.23■■□□□ 1.15
CHGA-202ENST00000334654 ATP5J2-PTCD1G3V325 749 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 TM4SF1P30408 202 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 TRIM28Q13263 835 aaKnown RBP22.22■■□□□ 1.15
CHGA-202ENST00000334654 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 ZNF652Q9Y2D9 606 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 UBN2Q6ZU65 1347 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 INTS3Q68E01 1043 aaKnown RBP22.22■■□□□ 1.15
CHGA-202ENST00000334654 DZIP1LQ8IYY4 767 aaKnown RBP22.22■■□□□ 1.15
CHGA-202ENST00000334654 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
CHGA-202ENST00000334654 LINS1Q8NG48 757 aa22.22■■□□□ 1.15
CHGA-202ENST00000334654 GPTP24298 496 aa22.21■■□□□ 1.15
CHGA-202ENST00000334654 NFIXQ14938 502 aa22.21■■□□□ 1.15
CHGA-202ENST00000334654 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
CHGA-202ENST00000334654 HSP90AB3PQ58FF7 597 aa22.21■■□□□ 1.15
CHGA-202ENST00000334654 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
CHGA-202ENST00000334654 AFDNP55196 1824 aaKnown RBP22.21■■□□□ 1.15
CHGA-202ENST00000334654 NEURL1BA8MQ27 555 aa22.2■■□□□ 1.14
CHGA-202ENST00000334654 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
CHGA-202ENST00000334654 TMEM57Q8N5G2 664 aa22.2■■□□□ 1.14
CHGA-202ENST00000334654 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
CHGA-202ENST00000334654 MSL1Q68DK7 614 aa22.19■■□□□ 1.14
CHGA-202ENST00000334654 NLRP10Q86W26 655 aa22.19■■□□□ 1.14
CHGA-202ENST00000334654 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
CHGA-202ENST00000334654 BICDL1Q6ZP65 573 aa22.18■■□□□ 1.14
CHGA-202ENST00000334654 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
CHGA-202ENST00000334654 ALDH1L1O75891 902 aa22.17■■□□□ 1.14
CHGA-202ENST00000334654 CCT4P50991 539 aaKnown RBP22.17■■□□□ 1.14
CHGA-202ENST00000334654 DDR1Q08345 913 aa22.17■■□□□ 1.14
CHGA-202ENST00000334654 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
CHGA-202ENST00000334654 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
CHGA-202ENST00000334654 ZBTB7AO95365 584 aa22.16■■□□□ 1.14
CHGA-202ENST00000334654 GCKRQ14397 625 aa22.16■■□□□ 1.14
CHGA-202ENST00000334654 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
CHGA-202ENST00000334654 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
CHGA-202ENST00000334654 IBTKQ9P2D0 1353 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms