RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
VRK3-201ENST00000316763 ATP10DQ9P241 1426 aa17.51■□□□□ 0.39
VRK3-201ENST00000316763 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
VRK3-201ENST00000316763 HMMRO75330 724 aa17.51■□□□□ 0.39
VRK3-201ENST00000316763 ANXA1P04083 346 aa17.51■□□□□ 0.39
VRK3-201ENST00000316763 TBC1D9Q6ZT07 1266 aa17.51■□□□□ 0.39
VRK3-201ENST00000316763 PLEKHM2Q8IWE5 1019 aa17.5■□□□□ 0.39
VRK3-201ENST00000316763 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
VRK3-201ENST00000316763 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
VRK3-201ENST00000316763 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
VRK3-201ENST00000316763 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
VRK3-201ENST00000316763 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
VRK3-201ENST00000316763 RBM42Q9BTD8 480 aaKnown RBP17.49■□□□□ 0.39
VRK3-201ENST00000316763 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
VRK3-201ENST00000316763 PALLDQ8WX93 1383 aa17.48■□□□□ 0.39
VRK3-201ENST00000316763 MEIS3Q99687 375 aa17.48■□□□□ 0.39
VRK3-201ENST00000316763 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 ADCY9O60503 1353 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 ILDR2Q71H61 639 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 APBA3O96018 575 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
VRK3-201ENST00000316763 LY75O60449 1722 aa17.46■□□□□ 0.39
VRK3-201ENST00000316763 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
VRK3-201ENST00000316763 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
VRK3-201ENST00000316763 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
VRK3-201ENST00000316763 SIK1P57059 783 aa17.45■□□□□ 0.38
VRK3-201ENST00000316763 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
VRK3-201ENST00000316763 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
VRK3-201ENST00000316763 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
VRK3-201ENST00000316763 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
VRK3-201ENST00000316763 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
VRK3-201ENST00000316763 GNAI2P04899 355 aa17.44■□□□□ 0.38
VRK3-201ENST00000316763 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
VRK3-201ENST00000316763 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 PLSCR1O15162 318 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 GNAI3P08754 354 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 MYL6BP14649 208 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 KCNQ4P56696 695 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 NBPF14Q5TI25 921 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
VRK3-201ENST00000316763 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
VRK3-201ENST00000316763 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
VRK3-201ENST00000316763 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
VRK3-201ENST00000316763 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
VRK3-201ENST00000316763 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
VRK3-201ENST00000316763 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
VRK3-201ENST00000316763 TJP1Q07157 1748 aa17.42■□□□□ 0.38
VRK3-201ENST00000316763 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 MCM4P33991 863 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 SF3B2Q13435 895 aaKnown RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 ITPK1Q13572 414 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 C16orf71Q8IYS4 520 aaPredicted RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 PROM2Q8N271 834 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 A1BGP04217 495 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 PIP4K2AP48426 406 aaPredicted RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 KIF2CQ99661 725 aa17.41■□□□□ 0.38
VRK3-201ENST00000316763 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
VRK3-201ENST00000316763 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
VRK3-201ENST00000316763 APBB1O00213 710 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 ALDH1L1O75891 902 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 STARD3NLO95772 234 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
VRK3-201ENST00000316763 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.37
VRK3-201ENST00000316763 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
VRK3-201ENST00000316763 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
VRK3-201ENST00000316763 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
VRK3-201ENST00000316763 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
VRK3-201ENST00000316763 K7ELQ4 463 aaPredicted RBP17.38■□□□□ 0.37
VRK3-201ENST00000316763 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
VRK3-201ENST00000316763 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
VRK3-201ENST00000316763 LINS1Q8NG48 757 aa17.38■□□□□ 0.37
VRK3-201ENST00000316763 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
VRK3-201ENST00000316763 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
VRK3-201ENST00000316763 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
VRK3-201ENST00000316763 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
VRK3-201ENST00000316763 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
VRK3-201ENST00000316763 SDSP20132 328 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 DDIT3P35638 169 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 BAG6P46379 1132 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 RABEP1Q15276 862 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
VRK3-201ENST00000316763 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
VRK3-201ENST00000316763 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
VRK3-201ENST00000316763 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms