RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 INTS5Q6P9B9 1019 aaKnown RBP10.24□□□□□ -0.77
CDC42-201ENST00000315554 COL23A1Q86Y22 540 aaPredicted RBP10.24□□□□□ -0.77
CDC42-201ENST00000315554 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 CCDC87Q9NVE4 849 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 PCDHB13Q9Y5F0 798 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 TUBGCP6Q96RT7 1819 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 CNTNAP4Q9C0A0 1308 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
CDC42-201ENST00000315554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 ZNF853P0CG23 659 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 GNAI1P63096 354 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 IFT57Q9NWB7 429 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 ELL2O00472 640 aaPredicted RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 STARD3NLO95772 234 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 EIF2S2P20042 333 aaKnown RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 MSL1Q68DK7 614 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
CDC42-201ENST00000315554 ZNF831Q5JPB2 1677 aa10.23□□□□□ -0.77
CDC42-201ENST00000315554 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
CDC42-201ENST00000315554 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
CDC42-201ENST00000315554 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
CDC42-201ENST00000315554 BABAM1Q9NWV8 329 aa10.22□□□□□ -0.77
CDC42-201ENST00000315554 CICQ96RK0 1608 aaPredicted RBP10.21□□□□□ -0.77
CDC42-201ENST00000315554 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.77
CDC42-201ENST00000315554 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDC42-201ENST00000315554 FKBP8Q14318 412 aa10.21□□□□□ -0.78
CDC42-201ENST00000315554 TRAPPC3LQ5T215 181 aa10.21□□□□□ -0.78
CDC42-201ENST00000315554 C8orf58Q8NAV2 365 aa10.21□□□□□ -0.78
CDC42-201ENST00000315554 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.78
CDC42-201ENST00000315554 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.78
CDC42-201ENST00000315554 SRP68Q9UHB9 627 aaKnown RBP10.21□□□□□ -0.78
CDC42-201ENST00000315554 CASZ1Q86V15 1759 aa10.21□□□□□ -0.78
CDC42-201ENST00000315554 SOS1Q07889 1333 aaPredicted RBP10.21□□□□□ -0.78
CDC42-201ENST00000315554 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 ANXA1P04083 346 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 SSFA2P28290 1259 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
CDC42-201ENST00000315554 WDR63Q8IWG1 891 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 NGEFQ8N5V2 710 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 TSPYL6Q8N831 410 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 ZNF521Q96K83 1311 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
CDC42-201ENST00000315554 TCERG1O14776 1098 aaKnown RBP10.19□□□□□ -0.78
CDC42-201ENST00000315554 MYL6BP14649 208 aa10.19□□□□□ -0.78
CDC42-201ENST00000315554 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
CDC42-201ENST00000315554 RFC4P35249 363 aa10.19□□□□□ -0.78
CDC42-201ENST00000315554 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
CDC42-201ENST00000315554 IL16Q14005 1332 aa10.19□□□□□ -0.78
CDC42-201ENST00000315554 COL15A1P39059 1388 aa10.19□□□□□ -0.78
CDC42-201ENST00000315554 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
CDC42-201ENST00000315554 EXOSC9Q06265 439 aaKnown RBP10.18□□□□□ -0.78
CDC42-201ENST00000315554 PROSER3Q2NL68 480 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 FLAD1Q8NFF5 587 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 QSER1Q2KHR3 1735 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 LAMB4A4D0S4 1761 aa10.18□□□□□ -0.78
CDC42-201ENST00000315554 GOLGA2Q08379 1002 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 USPL1Q5W0Q7 1092 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 MTFR1LQ9H019 292 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 SPON1Q9HCB6 807 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 IL6STP40189 918 aaPredicted RBP10.17□□□□□ -0.78
CDC42-201ENST00000315554 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
CDC42-201ENST00000315554 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 MYH16Q9H6N6 1097 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
CDC42-201ENST00000315554 CHPF2Q9P2E5 772 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
CDC42-201ENST00000315554 ZPR1O75312 459 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 GYS1P13807 737 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 PTGER2P43116 358 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 PDIA6Q15084 440 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 TWISTNBQ3B726 338 aaPredicted RBP10.16□□□□□ -0.78
CDC42-201ENST00000315554 TTLL7Q6ZT98 887 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
CDC42-201ENST00000315554 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
CDC42-201ENST00000315554 USP42Q9H9J4 1324 aaKnown RBP10.16□□□□□ -0.78
CDC42-201ENST00000315554 A0A087WZG4 1122 aa10.15□□□□□ -0.78
CDC42-201ENST00000315554 SLFN5Q08AF3 891 aa10.15□□□□□ -0.78
CDC42-201ENST00000315554 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.78
CDC42-201ENST00000315554 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
CDC42-201ENST00000315554 YTHDC1Q96MU7 727 aaKnown RBP10.15□□□□□ -0.78
CDC42-201ENST00000315554 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
CDC42-201ENST00000315554 NARFQ9UHQ1 456 aa10.15□□□□□ -0.78
CDC42-201ENST00000315554 E9PSI1 815 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms