RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 FAM114A1Q8IWE2 563 aa22.93■■□□□ 1.26
CTNND2-201ENST00000304623 NLRP5P59047 1200 aa22.93■■□□□ 1.26
CTNND2-201ENST00000304623 ZSCAN16Q9H4T2 348 aaPredicted RBP22.93■■□□□ 1.26
CTNND2-201ENST00000304623 TMOD2Q9NZR1 351 aa22.93■■□□□ 1.26
CTNND2-201ENST00000304623 BCCIPQ9P287 314 aaKnown RBP eCLIP22.93■■□□□ 1.26
CTNND2-201ENST00000304623 A0A087WZG4 1122 aa22.92■■□□□ 1.26
CTNND2-201ENST00000304623 AMPD3Q01432 767 aa22.92■■□□□ 1.26
CTNND2-201ENST00000304623 ZNF652Q9Y2D9 606 aa22.92■■□□□ 1.26
CTNND2-201ENST00000304623 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 DBF4Q9UBU7 674 aaPredicted RBP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 BIN1O00499 593 aa22.92■■□□□ 1.26
CTNND2-201ENST00000304623 PRKCSHP14314 528 aaPredicted RBP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 EHBP1Q8NDI1 1231 aa22.92■■□□□ 1.26
CTNND2-201ENST00000304623 RANBP6O60518 1105 aaKnown RBP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 HLTFQ14527 1009 aaKnown RBP eCLIP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
CTNND2-201ENST00000304623 CATIPQ7Z7H3 387 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 SLC5A1P13866 664 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 ANAPC15P60006 121 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 CCDC102BQ68D86 513 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.91■■□□□ 1.26
CTNND2-201ENST00000304623 UBA5Q9GZZ9 404 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 MAPK8IP2Q13387 824 aaPredicted RBP22.91■■□□□ 1.26
CTNND2-201ENST00000304623 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 USP16Q9Y5T5 823 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
CTNND2-201ENST00000304623 HOOK3Q86VS8 718 aa22.91■■□□□ 1.26
CTNND2-201ENST00000304623 FLIIQ13045 1269 aa22.9■■□□□ 1.26
CTNND2-201ENST00000304623 DNA2P51530 1060 aa22.9■■□□□ 1.26
CTNND2-201ENST00000304623 ZNF444Q8N0Y2 327 aaPredicted RBP22.9■■□□□ 1.26
CTNND2-201ENST00000304623 GIGYF2Q6Y7W6 1299 aaKnown RBP22.9■■□□□ 1.26
CTNND2-201ENST00000304623 CCDC82Q8N4S0 544 aa22.9■■□□□ 1.26
CTNND2-201ENST00000304623 STAMBPO95630 424 aa22.89■■□□□ 1.26
CTNND2-201ENST00000304623 GNG11P61952 73 aa22.89■■□□□ 1.26
CTNND2-201ENST00000304623 TMX1Q9H3N1 280 aa22.89■■□□□ 1.26
CTNND2-201ENST00000304623 CLCN1P35523 988 aa22.89■■□□□ 1.26
CTNND2-201ENST00000304623 NEK1Q96PY6 1258 aa22.89■■□□□ 1.26
CTNND2-201ENST00000304623 IL16Q14005 1332 aa22.89■■□□□ 1.25
CTNND2-201ENST00000304623 NSD2O96028 1365 aa22.89■■□□□ 1.25
CTNND2-201ENST00000304623 NCOA1Q15788 1441 aa22.89■■□□□ 1.25
CTNND2-201ENST00000304623 ZSCAN22P10073 491 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 CETN1Q12798 172 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 TCP11L1Q9NUJ3 509 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 ORC3Q9UBD5 711 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 LMAN1P49257 510 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 CCDC12Q8WUD4 166 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 CALML4Q96GE6 196 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 SPECC1LQ69YQ0 1117 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 HMGB2P26583 209 aaKnown RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 HCLS1P14317 486 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 HDAC1Q13547 482 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 KRT222Q8N1A0 295 aa22.88■■□□□ 1.25
CTNND2-201ENST00000304623 CTNNBL1Q8WYA6 563 aaPredicted RBP22.88■■□□□ 1.25
CTNND2-201ENST00000304623 PPP4R3AQ6IN85 833 aa22.87■■□□□ 1.25
CTNND2-201ENST00000304623 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
CTNND2-201ENST00000304623 TTF1Q15361 905 aaPredicted RBP22.87■■□□□ 1.25
CTNND2-201ENST00000304623 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
CTNND2-201ENST00000304623 LARP6Q9BRS8 491 aaKnown RBP22.87■■□□□ 1.25
CTNND2-201ENST00000304623 IGHDP01880 384 aa22.87■■□□□ 1.25
CTNND2-201ENST00000304623 CRACR2BQ8N4Y2 399 aaPredicted RBP22.87■■□□□ 1.25
CTNND2-201ENST00000304623 CCDC40Q4G0X9 1142 aa22.86■■□□□ 1.25
CTNND2-201ENST00000304623 TMCO5BA8MYB1 307 aa22.86■■□□□ 1.25
CTNND2-201ENST00000304623 ZC3H6P61129 1189 aaKnown RBP22.86■■□□□ 1.25
CTNND2-201ENST00000304623 TMX3Q96JJ7 454 aa22.86■■□□□ 1.25
CTNND2-201ENST00000304623 CUL5Q93034 780 aa22.86■■□□□ 1.25
CTNND2-201ENST00000304623 ANKRD18BA2A2Z9 1011 aa22.86■■□□□ 1.25
CTNND2-201ENST00000304623 TRERF1Q96PN7 1200 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 TMOD3Q9NYL9 352 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 NUCB1Q02818 461 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 CKAP4Q07065 602 aaKnown RBP22.85■■□□□ 1.25
CTNND2-201ENST00000304623 SPDYE4A6NLX3 237 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 MAATS1Q7Z4T9 603 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 TUBB4AP04350 444 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 KIF5BP33176 963 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 NF2P35240 595 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 NME9Q86XW9 330 aa22.85■■□□□ 1.25
CTNND2-201ENST00000304623 TMEM67Q5HYA8 995 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 GOLIM4O00461 696 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 PTCD1O75127 700 aaKnown RBP22.84■■□□□ 1.25
CTNND2-201ENST00000304623 NOLC1Q14978 699 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTNND2-201ENST00000304623 GIMAP6Q6P9H5 292 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 LRRC27Q9C0I9 530 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 IBSPP21815 317 aaPredicted RBP22.84■■□□□ 1.25
CTNND2-201ENST00000304623 NCOA7Q8NI08 942 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 CEP112Q8N8E3 955 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 JADE2Q9NQC1 790 aa22.84■■□□□ 1.25
CTNND2-201ENST00000304623 UBE4AQ14139 1066 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 IFI16Q16666 785 aaKnown RBP22.83■■□□□ 1.25
CTNND2-201ENST00000304623 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 EHMT1Q9H9B1 1298 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 UBA7P41226 1012 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 METAP2P50579 478 aaKnown RBP eCLIP22.83■■□□□ 1.25
CTNND2-201ENST00000304623 CCDC96Q2M329 555 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 FAM200AQ8TCP9 573 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 RMND1Q9NWS8 449 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 TICAM2Q86XR7 235 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 TIGD1Q96MW7 591 aa22.83■■□□□ 1.25
CTNND2-201ENST00000304623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms