RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 KIF5BP33176 963 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.339e-7■■■■■ 27.6
GCN1-201ENST00000300648 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
GCN1-201ENST00000300648 ANKLE2Q86XL3 938 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 NOL3O60936 208 aaKnown RBP12.97□□□□□ -0.33
GCN1-201ENST00000300648 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
GCN1-201ENST00000300648 BMP2KLQ5H9B9 411 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 RSRC1Q96IZ7 334 aaKnown RBP12.96□□□□□ -0.33
GCN1-201ENST00000300648 TUBB2AQ13885 445 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 KIAA0753Q2KHM9 967 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 IQCA1Q86XH1 822 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 TUBB2BQ9BVA1 445 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 DNAJC21Q5F1R6 531 aaKnown RBP12.96□□□□□ -0.33
GCN1-201ENST00000300648 SMC6Q96SB8 1091 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
GCN1-201ENST00000300648 IQCGQ9H095 443 aaKnown RBP12.96□□□□□ -0.33
GCN1-201ENST00000300648 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 EBAG9O00559 213 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 ADCY5O95622 1261 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
GCN1-201ENST00000300648 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
GCN1-201ENST00000300648 CTAGE9A4FU28 777 aa12.96□□□□□ -0.34
GCN1-201ENST00000300648 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.34
GCN1-201ENST00000300648 MAATS1Q7Z4T9 603 aa12.96□□□□□ -0.34
GCN1-201ENST00000300648 GGNBP2Q9H3C7 697 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 TRAF1Q13077 416 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 IGHMBP2P38935 993 aaKnown RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 USP25Q9UHP3 1055 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 CCDC6Q16204 474 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 STIM2Q9P246 746 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
GCN1-201ENST00000300648 ZNF165P49910 485 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
GCN1-201ENST00000300648 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 FKBP4Q02790 459 aaKnown RBP eCLIP12.94□□□□□ -0.34
GCN1-201ENST00000300648 B4GALNT4Q76KP1 1039 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CTAGE15A4D2H0 777 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
GCN1-201ENST00000300648 CTAGE8P0CG41 777 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CTAGE6Q86UF2 777 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CTAGE4Q8IX94 777 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 GPATCH11Q8N954 259 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CUL5Q93034 780 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 STARD3NLO95772 234 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
GCN1-201ENST00000300648 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 KIF3CO14782 793 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 ALDH3A1P30838 453 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 CCDC97Q96F63 343 aaPredicted RBP12.94□□□□□ -0.34
GCN1-201ENST00000300648 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 ANAPC4Q9UJX5 808 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
GCN1-201ENST00000300648 STX6O43752 255 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
GCN1-201ENST00000300648 CCDC94Q9BW85 323 aaPredicted RBP12.93□□□□□ -0.34
GCN1-201ENST00000300648 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
GCN1-201ENST00000300648 CAMK4Q16566 473 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
GCN1-201ENST00000300648 IFT74Q96LB3 600 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 NESP48681 1621 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 ATP5DP30049 168 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
GCN1-201ENST00000300648 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
GCN1-201ENST00000300648 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 KRT83P78385 493 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 TTC31Q49AM3 519 aaPredicted RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms