RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
COL6A2-201ENST00000300527 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
COL6A2-201ENST00000300527 STAP2Q9UGK3 403 aa17.4■□□□□ 0.38
COL6A2-201ENST00000300527 KIDINS220Q9ULH0 1771 aa17.4■□□□□ 0.38
COL6A2-201ENST00000300527 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-201ENST00000300527 AMPHP49418 695 aa17.4■□□□□ 0.38
COL6A2-201ENST00000300527 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-201ENST00000300527 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-201ENST00000300527 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
COL6A2-201ENST00000300527 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
COL6A2-201ENST00000300527 SMTNL1A8MU46 457 aa17.39■□□□□ 0.37
COL6A2-201ENST00000300527 HDGFL1Q5TGJ6 251 aa17.39■□□□□ 0.37
COL6A2-201ENST00000300527 MAP2P11137 1827 aaKnown RBP17.39■□□□□ 0.37
COL6A2-201ENST00000300527 ZNF75DP51815 510 aa17.39■□□□□ 0.37
COL6A2-201ENST00000300527 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
COL6A2-201ENST00000300527 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 LMTK2Q8IWU2 1503 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 USP27XA6NNY8 438 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 CCDC144BQ3MJ40 725 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-201ENST00000300527 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
COL6A2-201ENST00000300527 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-201ENST00000300527 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 FEZ1Q99689 392 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 ST7Q9NRC1 585 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 CTNNA3Q9UI47 895 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
COL6A2-201ENST00000300527 UHRF1BP1LA0JNW5 1464 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 NR1I2O75469 434 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 BECN2A8MW95 431 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 CTIFO43310 598 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 PA2G4Q9UQ80 394 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
COL6A2-201ENST00000300527 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
COL6A2-201ENST00000300527 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
COL6A2-201ENST00000300527 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
COL6A2-201ENST00000300527 RUFY2Q8WXA3 655 aa17.36■□□□□ 0.37
COL6A2-201ENST00000300527 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
COL6A2-201ENST00000300527 ELF2Q15723 593 aa17.36■□□□□ 0.37
COL6A2-201ENST00000300527 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
COL6A2-201ENST00000300527 FGD1P98174 961 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 FAM227BQ96M60 508 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
COL6A2-201ENST00000300527 H3BQV1 296 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 C14orf37Q86TY3 774 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
COL6A2-201ENST00000300527 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
COL6A2-201ENST00000300527 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
COL6A2-201ENST00000300527 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
COL6A2-201ENST00000300527 SKILP12757 684 aa17.34■□□□□ 0.37
COL6A2-201ENST00000300527 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
COL6A2-201ENST00000300527 ZBTB9Q96C00 473 aa17.34■□□□□ 0.37
COL6A2-201ENST00000300527 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
COL6A2-201ENST00000300527 SH2B1Q9NRF2 756 aaPredicted RBP17.34■□□□□ 0.37
COL6A2-201ENST00000300527 ABCA9Q8IUA7 1624 aa17.33■□□□□ 0.37
COL6A2-201ENST00000300527 SIL1Q9H173 461 aa17.33■□□□□ 0.37
COL6A2-201ENST00000300527 JAK2O60674 1132 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 VPS53Q5VIR6 699 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 AACSQ86V21 672 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 CPS1P31327 1500 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 LRRC2Q9BYS8 371 aa17.33■□□□□ 0.36
COL6A2-201ENST00000300527 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
COL6A2-201ENST00000300527 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 LEO1Q8WVC0 666 aaPredicted RBP17.32■□□□□ 0.36
COL6A2-201ENST00000300527 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
COL6A2-201ENST00000300527 TAF6LQ9Y6J9 622 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 CREB3L3Q68CJ9 461 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 KIF18AQ8NI77 898 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
COL6A2-201ENST00000300527 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 KMT5BQ4FZB7 885 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 ACEP12821 1306 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 CDC42BPGQ6DT37 1551 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 EYA1Q99502 592 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL6A2-201ENST00000300527 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-201ENST00000300527 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
COL6A2-201ENST00000300527 CRB1P82279 1406 aa17.3■□□□□ 0.36
COL6A2-201ENST00000300527 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
COL6A2-201ENST00000300527 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms