RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 ALKQ9UM73 1620 aa20.68■□□□□ 0.9
CHRNA5-201ENST00000299565 NCOA3Q9Y6Q9 1424 aa20.68■□□□□ 0.9
CHRNA5-201ENST00000299565 LARGE1O95461 756 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 NBPF6Q5VWK0 638 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 NBPF4Q96M43 638 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 INTS4Q96HW7 963 aaKnown RBP20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 PSMA5P28066 241 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 HSPA4P34932 840 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 MYD88Q99836 296 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 ATP10DQ9P241 1426 aa20.67■□□□□ 0.9
CHRNA5-201ENST00000299565 CBX1P83916 185 aa20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 RUFY3Q7L099 469 aa20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 CYP2E1P05181 493 aaPredicted RBP20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 NOLC1Q14978 699 aaKnown RBP eCLIP20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 FILIP1Q7Z7B0 1213 aa20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 CPS1P31327 1500 aa20.66■□□□□ 0.9
CHRNA5-201ENST00000299565 STK11IPQ8N1F8 1099 aa20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 RAB11FIP4Q86YS3 637 aa20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 OSBPL3Q9H4L5 887 aa20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 ATP7BP35670 1465 aa20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 CCT2P78371 535 aaKnown RBP20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 PROSER3Q2NL68 480 aa20.65■□□□□ 0.9
CHRNA5-201ENST00000299565 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.9
CHRNA5-201ENST00000299565 MAP3K11Q16584 847 aa20.64■□□□□ 0.9
CHRNA5-201ENST00000299565 C16orf45Q96MC5 204 aaPredicted RBP20.64■□□□□ 0.9
CHRNA5-201ENST00000299565 DACT1Q9NYF0 836 aa20.64■□□□□ 0.9
CHRNA5-201ENST00000299565 IBTKQ9P2D0 1353 aaPredicted RBP20.64■□□□□ 0.89
CHRNA5-201ENST00000299565 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
CHRNA5-201ENST00000299565 LUZP1Q86V48 1076 aa20.64■□□□□ 0.89
CHRNA5-201ENST00000299565 RAD50Q92878 1312 aa20.64■□□□□ 0.89
CHRNA5-201ENST00000299565 CDK12Q9NYV4 1490 aaPredicted RBP20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 GNL2Q13823 731 aaKnown RBP20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 MAP3K5Q99683 1374 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 SPDYE4A6NLX3 237 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 PPLO60437 1756 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 TAF7LQ5H9L4 462 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 ERC1Q8IUD2 1116 aa20.63■□□□□ 0.89
CHRNA5-201ENST00000299565 LETM1O95202 739 aaPredicted RBP20.62■□□□□ 0.89
CHRNA5-201ENST00000299565 PDCP20941 246 aa20.62■□□□□ 0.89
CHRNA5-201ENST00000299565 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
CHRNA5-201ENST00000299565 FRMPD1Q5SYB0 1578 aa20.62■□□□□ 0.89
CHRNA5-201ENST00000299565 NEO1Q92859 1461 aa20.62■□□□□ 0.89
CHRNA5-201ENST00000299565 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 CHST3Q7LGC8 479 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 SDF4Q9BRK5 362 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 BICC1Q9H694 974 aaKnown RBP20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 WASHC4Q2M389 1173 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 PIK3C2BO00750 1634 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 IGSF3O75054 1194 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 CREB3L3Q68CJ9 461 aa20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 ZSCAN31Q96LW9 406 aaPredicted RBP20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
CHRNA5-201ENST00000299565 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 ME3Q16798 604 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 ADGRB2O60241 1585 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 CUL4AQ13619 759 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 TPD52L1Q16890 204 aaPredicted RBP20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 EVI5LQ96CN4 794 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 SBNO1A3KN83 1393 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 KIF3AQ9Y496 699 aa20.6■□□□□ 0.89
CHRNA5-201ENST00000299565 ARHGAP31Q2M1Z3 1444 aa20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 ME1P48163 572 aa20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 CDC37L1Q7L3B6 337 aa20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 A2ML1A8K2U0 1454 aa20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 ARHGEF28Q8N1W1 1705 aaKnown RBP20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 EIF4A1P60842 406 aaKnown RBP20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 ZHX1Q9UKY1 873 aaPredicted RBP20.59■□□□□ 0.89
CHRNA5-201ENST00000299565 GRM8O00222 908 aa20.58■□□□□ 0.89
CHRNA5-201ENST00000299565 CCDC186Q7Z3E2 898 aa20.58■□□□□ 0.89
CHRNA5-201ENST00000299565 BRF1Q92994 677 aa20.58■□□□□ 0.89
CHRNA5-201ENST00000299565 TLR7Q9NYK1 1049 aaKnown RBP20.58■□□□□ 0.89
CHRNA5-201ENST00000299565 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.89
CHRNA5-201ENST00000299565 PTGS1P23219 599 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 ANO6Q4KMQ2 910 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 HS1BP3Q53T59 392 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 CCDC73Q6ZRK6 1079 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 ERCC4Q92889 916 aaPredicted RBP20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 TOMM22Q9NS69 142 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 CPSF1Q10570 1443 aaKnown RBP20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 SNRKQ9NRH2 765 aa20.58■□□□□ 0.88
CHRNA5-201ENST00000299565 APPP05067 770 aa20.57■□□□□ 0.88
CHRNA5-201ENST00000299565 CLEC17AQ6ZS10 378 aa20.57■□□□□ 0.88
CHRNA5-201ENST00000299565 XAGE3Q8WTP9 111 aa20.57■□□□□ 0.88
CHRNA5-201ENST00000299565 LSG1Q9H089 658 aaKnown RBP20.57■□□□□ 0.88
CHRNA5-201ENST00000299565 DNAJC25Q9H1X3 360 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms