RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 ARHGEF12Q9NZN5 1544 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 ZNF76P36508 570 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
USP6NL-201ENST00000277575 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-201ENST00000277575 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-201ENST00000277575 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 ABCC1P33527 1531 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 LDHCP07864 332 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
USP6NL-201ENST00000277575 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 ATP8B2P98198 1209 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 IP6K1Q92551 441 aa13.19□□□□□ -0.3
USP6NL-201ENST00000277575 SDSP20132 328 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 PDE1AP54750 535 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
USP6NL-201ENST00000277575 EIF2AK4Q9P2K8 1649 aaKnown RBP13.18□□□□□ -0.3
USP6NL-201ENST00000277575 HOXC9P31274 260 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 HAND2P61296 217 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 CCP110O43303 1012 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
USP6NL-201ENST00000277575 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
USP6NL-201ENST00000277575 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-201ENST00000277575 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
USP6NL-201ENST00000277575 PLEKHH1Q9ULM0 1364 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 TRPM2O94759 1503 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 SYCE3A1L190 88 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 UQCRFS1P1P0C7P4 283 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 SYCP1Q15431 976 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 SSFA2P28290 1259 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 ZFYVE9O95405 1425 aa13.17□□□□□ -0.3
USP6NL-201ENST00000277575 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 RLBP1P12271 317 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 CAMK4Q16566 473 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 MAP3K5Q99683 1374 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 BAG3O95817 575 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
USP6NL-201ENST00000277575 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 SETDB2Q96T68 719 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 ACBD3Q9H3P7 528 aa13.16□□□□□ -0.3
USP6NL-201ENST00000277575 ATP10AO60312 1499 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 HMG20BQ9P0W2 317 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
USP6NL-201ENST00000277575 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 ORAI2Q96SN7 254 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
USP6NL-201ENST00000277575 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
USP6NL-201ENST00000277575 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP6NL-201ENST00000277575 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 ADGRL2O95490 1459 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 IARSP41252 1262 aaKnown RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 TNPO1Q92973 898 aaKnown RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
USP6NL-201ENST00000277575 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-201ENST00000277575 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms