RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ADCY5O95622 1261 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 SPATA32Q96LK8 384 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 RRP9O43818 475 aaKnown RBP23.53■■□□□ 1.36
CSPG5-201ENST00000264723 IL17REQ8NFR9 667 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 SNRKQ9NRH2 765 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 MTMR7Q9Y216 660 aa23.53■■□□□ 1.36
CSPG5-201ENST00000264723 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 GPT2Q8TD30 523 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 G3V3G9 751 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 CCDC192P0DO97 292 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 DCAF8Q5TAQ9 597 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 USP44Q9H0E7 712 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 SDF4Q9BRK5 362 aa23.52■■□□□ 1.36
CSPG5-201ENST00000264723 NSFL1CQ9UNZ2 370 aaKnown RBP23.52■■□□□ 1.36
CSPG5-201ENST00000264723 ATP2B1P20020 1258 aa23.51■■□□□ 1.35
CSPG5-201ENST00000264723 CCDC183Q5T5S1 534 aa23.51■■□□□ 1.35
CSPG5-201ENST00000264723 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
CSPG5-201ENST00000264723 RASSF8Q8NHQ8 419 aa23.51■■□□□ 1.35
CSPG5-201ENST00000264723 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
CSPG5-201ENST00000264723 C17orf53Q8N3J3 647 aaPredicted RBP23.5■■□□□ 1.35
CSPG5-201ENST00000264723 PDCP20941 246 aa23.5■■□□□ 1.35
CSPG5-201ENST00000264723 SNRPA1P09661 255 aaKnown RBP23.5■■□□□ 1.35
CSPG5-201ENST00000264723 AKAP17AQ02040 695 aaKnown RBP23.5■■□□□ 1.35
CSPG5-201ENST00000264723 NDUFB9Q9Y6M9 179 aa23.5■■□□□ 1.35
CSPG5-201ENST00000264723 ZSCAN22P10073 491 aaPredicted RBP23.49■■□□□ 1.35
CSPG5-201ENST00000264723 SOS1Q07889 1333 aaPredicted RBP23.49■■□□□ 1.35
CSPG5-201ENST00000264723 NUP62CLQ9H1M0 184 aa23.49■■□□□ 1.35
CSPG5-201ENST00000264723 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
CSPG5-201ENST00000264723 LAMC1P11047 1609 aa23.49■■□□□ 1.35
CSPG5-201ENST00000264723 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
CSPG5-201ENST00000264723 CCDC73Q6ZRK6 1079 aa23.49■■□□□ 1.35
CSPG5-201ENST00000264723 IDH1O75874 414 aaKnown RBP23.49■■□□□ 1.35
CSPG5-201ENST00000264723 MEX3CQ5U5Q3 659 aaKnown RBP23.49■■□□□ 1.35
CSPG5-201ENST00000264723 TULP4Q9NRJ4 1543 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 SYT1P21579 422 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 KSR2Q6VAB6 950 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 CHMP4CQ96CF2 233 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 PRDM10Q9NQV6 1147 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 GRM8O00222 908 aa23.48■■□□□ 1.35
CSPG5-201ENST00000264723 STARD3NLO95772 234 aa23.47■■□□□ 1.35
CSPG5-201ENST00000264723 TBC1D2BQ9UPU7 963 aa23.47■■□□□ 1.35
CSPG5-201ENST00000264723 RBM8AQ9Y5S9 174 aaKnown RBP23.47■■□□□ 1.35
CSPG5-201ENST00000264723 RNMTO43148 476 aaKnown RBP23.47■■□□□ 1.35
CSPG5-201ENST00000264723 NPHP3Q7Z494 1330 aa23.47■■□□□ 1.35
CSPG5-201ENST00000264723 BRPF1P55201 1214 aaPredicted RBP23.47■■□□□ 1.35
CSPG5-201ENST00000264723 CCT2P78371 535 aaKnown RBP23.47■■□□□ 1.35
CSPG5-201ENST00000264723 TRIM29Q14134 588 aa23.46■■□□□ 1.35
CSPG5-201ENST00000264723 FILIP1Q7Z7B0 1213 aa23.46■■□□□ 1.35
CSPG5-201ENST00000264723 RAB11FIP4Q86YS3 637 aa23.46■■□□□ 1.35
CSPG5-201ENST00000264723 LETM1O95202 739 aaPredicted RBP23.46■■□□□ 1.35
CSPG5-201ENST00000264723 METTL24Q5JXM2 366 aa23.46■■□□□ 1.35
CSPG5-201ENST00000264723 ME1P48163 572 aa23.45■■□□□ 1.34
CSPG5-201ENST00000264723 ZSCAN31Q96LW9 406 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-201ENST00000264723 RAD21O60216 631 aa23.45■■□□□ 1.34
CSPG5-201ENST00000264723 DDX46Q7L014 1031 aaKnown RBP23.45■■□□□ 1.34
CSPG5-201ENST00000264723 ZKSCAN5Q9Y2L8 839 aa23.45■■□□□ 1.34
CSPG5-201ENST00000264723 IQGAP1P46940 1657 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 ANAPC15P60006 121 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
CSPG5-201ENST00000264723 GOLIM4O00461 696 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 IFIT1P09914 478 aaKnown RBP23.44■■□□□ 1.34
CSPG5-201ENST00000264723 MAP3K11Q16584 847 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
CSPG5-201ENST00000264723 SNX14Q9Y5W7 946 aa23.44■■□□□ 1.34
CSPG5-201ENST00000264723 GLI2P10070 1586 aa23.43■■□□□ 1.34
CSPG5-201ENST00000264723 EDC3Q96F86 508 aaKnown RBP23.43■■□□□ 1.34
CSPG5-201ENST00000264723 FAM227BQ96M60 508 aa23.43■■□□□ 1.34
CSPG5-201ENST00000264723 ZNF445P59923 1031 aa23.43■■□□□ 1.34
CSPG5-201ENST00000264723 TPD52L1Q16890 204 aaPredicted RBP23.43■■□□□ 1.34
CSPG5-201ENST00000264723 UBE2HP62256 183 aa23.42■■□□□ 1.34
CSPG5-201ENST00000264723 NMIQ13287 307 aaPredicted RBP23.42■■□□□ 1.34
CSPG5-201ENST00000264723 EVI5LQ96CN4 794 aa23.42■■□□□ 1.34
CSPG5-201ENST00000264723 LINS1Q8NG48 757 aa23.42■■□□□ 1.34
CSPG5-201ENST00000264723 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
CSPG5-201ENST00000264723 F13A1P00488 732 aa23.41■■□□□ 1.34
CSPG5-201ENST00000264723 RASEFQ8IZ41 740 aa23.41■■□□□ 1.34
CSPG5-201ENST00000264723 TRMT112Q9UI30 125 aaKnown RBP23.41■■□□□ 1.34
CSPG5-201ENST00000264723 KINO60870 393 aaKnown RBP23.41■■□□□ 1.34
CSPG5-201ENST00000264723 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
CSPG5-201ENST00000264723 TSC1Q92574 1164 aa23.41■■□□□ 1.34
CSPG5-201ENST00000264723 ARAP3Q8WWN8 1544 aa23.4■■□□□ 1.34
CSPG5-201ENST00000264723 IQSEC2Q5JU85 1478 aa23.4■■□□□ 1.34
CSPG5-201ENST00000264723 ERICH2A1L162 156 aa23.4■■□□□ 1.34
CSPG5-201ENST00000264723 PPRC1Q5VV67 1664 aaKnown RBP23.4■■□□□ 1.34
CSPG5-201ENST00000264723 CEP152O94986 1710 aa23.4■■□□□ 1.34
CSPG5-201ENST00000264723 SGSM2O43147 1006 aa23.39■■□□□ 1.34
CSPG5-201ENST00000264723 BRD1O95696 1058 aa23.39■■□□□ 1.34
CSPG5-201ENST00000264723 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.34
CSPG5-201ENST00000264723 ABCF2Q9UG63 623 aa23.39■■□□□ 1.34
CSPG5-201ENST00000264723 OFD1O75665 1012 aa23.39■■□□□ 1.34
CSPG5-201ENST00000264723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.39■■□□□ 1.34
CSPG5-201ENST00000264723 PNPLA6Q8IY17 1366 aa23.39■■□□□ 1.33
CSPG5-201ENST00000264723 ANKRD1Q15327 319 aa23.39■■□□□ 1.33
CSPG5-201ENST00000264723 ADGRB3O60242 1522 aa23.39■■□□□ 1.33
CSPG5-201ENST00000264723 CHST3Q7LGC8 479 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms