RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CCT4P50991 539 aaKnown RBP16.76■□□□□ 0.27
SCARF1-201ENST00000263071 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-201ENST00000263071 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
SCARF1-201ENST00000263071 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 MBD3O95983 291 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
SCARF1-201ENST00000263071 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-201ENST00000263071 CLEC17AQ6ZS10 378 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 METP08581 1390 aa16.75■□□□□ 0.27
SCARF1-201ENST00000263071 CYP2C19P33261 490 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
SCARF1-201ENST00000263071 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 TRIM66O15016 1216 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 NPHP1O15259 732 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
SCARF1-201ENST00000263071 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 SATB1Q01826 763 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 EYA1Q99502 592 aa16.74■□□□□ 0.27
SCARF1-201ENST00000263071 GNAI3P08754 354 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
SCARF1-201ENST00000263071 CCDC30Q5VVM6 783 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-201ENST00000263071 MYO1CO00159 1063 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 NBPF7P0C2Y1 421 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-201ENST00000263071 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 JRKLQ9Y4A0 524 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
SCARF1-201ENST00000263071 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-201ENST00000263071 CWC15Q9P013 229 aaKnown RBP16.73■□□□□ 0.27
SCARF1-201ENST00000263071 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 AK2P54819 239 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 KRBA2Q6ZNG9 492 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 COL3A1P02461 1466 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-201ENST00000263071 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 NEK11Q8NG66 645 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 C16orf45Q96MC5 204 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-201ENST00000263071 PTCH1Q13635 1447 aa16.72■□□□□ 0.27
SCARF1-201ENST00000263071 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
SCARF1-201ENST00000263071 SYCP1Q15431 976 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 PI4KAP2A4QPH2 592 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-201ENST00000263071 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
SCARF1-201ENST00000263071 PI4KAP1Q8N8J0 262 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 ABCC3O15438 1527 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-201ENST00000263071 ABTB2Q8N961 1025 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
SCARF1-201ENST00000263071 CCDC8Q9H0W5 538 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-201ENST00000263071 PTPRCP08575 1304 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 BRD1O95696 1058 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 PLCD4Q9BRC7 762 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARF1-201ENST00000263071 V9GYY5 206 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-201ENST00000263071 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
SCARF1-201ENST00000263071 SMTNL1A8MU46 457 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 KCNQ3O43525 872 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 LARGE1O95461 756 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 TXLNBQ8N3L3 684 aa16.7■□□□□ 0.26
SCARF1-201ENST00000263071 GPS2Q13227 327 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 PYCARDQ9ULZ3 195 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 KDM4AO75164 1064 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 SYT1P21579 422 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 GTF3C6Q969F1 213 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
SCARF1-201ENST00000263071 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
SCARF1-201ENST00000263071 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
SCARF1-201ENST00000263071 GJB2P29033 226 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 CEP120Q8N960 986 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 CHPF2Q9P2E5 772 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 STX6O43752 255 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 POLR3GO15318 223 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-201ENST00000263071 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 PTPRMP28827 1452 aa16.68■□□□□ 0.26
SCARF1-201ENST00000263071 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 TPM3P06753 285 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 TTC31Q49AM3 519 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-201ENST00000263071 CCDC91Q7Z6B0 441 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 TEFQ10587 303 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms