RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 R3HCC1Q9Y3T6 440 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-201ENST00000243253 MCCP23508 829 aa14.43□□□□□ -0.1
SEC61A1-201ENST00000243253 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-201ENST00000243253 UVSSAQ2YD98 709 aa14.43□□□□□ -0.1
SEC61A1-201ENST00000243253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.43□□□□□ -0.1
SEC61A1-201ENST00000243253 SYT1P21579 422 aa14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 ZMYND15Q9H091 742 aa14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 CNPY2Q9Y2B0 182 aa14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 TBX22Q9Y458 520 aa14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 ZSCAN22P10073 491 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 LAMA4Q16363 1823 aa14.42□□□□□ -0.1
SEC61A1-201ENST00000243253 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 FER1L4A9Z1Z3 1794 aa14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 LRRC59Q96AG4 307 aaKnown RBP14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 SPTLC3Q9NUV7 552 aa14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 PXDNQ92626 1479 aa14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 GTF2F1P35269 517 aaKnown RBP eCLIP14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 ADCK5Q3MIX3 580 aa14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 ESCO1Q5FWF5 840 aa14.41□□□□□ -0.1
SEC61A1-201ENST00000243253 HOXB7P09629 217 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 PTH1RQ03431 593 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 UQCRHLA0A096LP55 91 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 UQCRHP07919 91 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 NECTIN1Q15223 517 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 TTC41PQ6P2S7 1318 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 F13A1P00488 732 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 CSPP1Q1MSJ5 1256 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
SEC61A1-201ENST00000243253 DYNC1I1O14576 645 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 PPFIA3O75145 1194 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 SURF6O75683 361 aaKnown RBP14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 FAM184AQ8NB25 1140 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 MTMR6Q9Y217 621 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 STX6O43752 255 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 SIL1Q9H173 461 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 LIMCH1Q9UPQ0 1083 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 RGPD5Q99666 1765 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 UBE2HP62256 183 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 SASS6Q6UVJ0 657 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
SEC61A1-201ENST00000243253 SETD1BQ9UPS6 1966 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 KCNQ3O43525 872 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 CPA1P15085 419 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 LGR6Q9HBX8 967 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 TRPM3Q9HCF6 1732 aaPredicted RBP14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 RBM10P98175 930 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 TM6SF1Q9BZW5 370 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 SCN11AQ9UI33 1791 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 UTYO14607 1347 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 SLIT3O75094 1523 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 GLI3P10071 1580 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 ZNF710Q8N1W2 664 aa14.38□□□□□ -0.11
SEC61A1-201ENST00000243253 KCNJ4P48050 445 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 VPS53Q5VIR6 699 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 KCNF1Q9H3M0 494 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 DDX60Q8IY21 1712 aaKnown RBP14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 ADGRL3Q9HAR2 1447 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 PSME1Q06323 249 aa14.37□□□□□ -0.11
SEC61A1-201ENST00000243253 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 FOSBP53539 338 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 MYRIPQ8NFW9 859 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 PRDM4Q9UKN5 801 aa14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
SEC61A1-201ENST00000243253 KDM4AO75164 1064 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 NBPF6Q5VWK0 638 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 NBPF4Q96M43 638 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 PHF14O94880 888 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 KCNA6P17658 529 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 ME3Q16798 604 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 DNAAF4Q8WXU2 420 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 ADCY5O95622 1261 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 TEFQ10587 303 aa14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-201ENST00000243253 COL15A1P39059 1388 aa14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 ZNF830Q96NB3 372 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 ALDH8A1Q9H2A2 487 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 MYL6BP14649 208 aa14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 KIAA2012Q0VF49 1180 aa14.34□□□□□ -0.11
SEC61A1-201ENST00000243253 MAP4K1Q92918 833 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms