RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 SGSM2O43147 1006 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 DACT1Q9NYF0 836 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
PCDHB3-201ENST00000231130 LMTK2Q8IWU2 1503 aa16.77■□□□□ 0.27
PCDHB3-201ENST00000231130 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
PCDHB3-201ENST00000231130 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.27
PCDHB3-201ENST00000231130 TNMDQ9H2S6 317 aa16.77■□□□□ 0.27
PCDHB3-201ENST00000231130 MTMR6Q9Y217 621 aa16.77■□□□□ 0.27
PCDHB3-201ENST00000231130 COL9A3Q14050 684 aaPredicted RBP16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 KIF18AQ8NI77 898 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 SALL3Q9BXA9 1300 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 A0A087WWV3 80 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 MAP3K11Q16584 847 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
PCDHB3-201ENST00000231130 RAD50Q92878 1312 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 ARAP3Q8WWN8 1544 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 TYRO3Q06418 890 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 CDC37L1Q7L3B6 337 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 HNRNPH2P55795 449 aaKnown RBP16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 ME3Q16798 604 aa16.75■□□□□ 0.27
PCDHB3-201ENST00000231130 SOS1Q07889 1333 aaPredicted RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 CTIFO43310 598 aaKnown RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 APPP05067 770 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 DNAJC25Q9H1X3 360 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 EDC4Q6P2E9 1401 aaKnown RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 RSPH14Q9UHP6 348 aa16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 PA2G4Q9UQ80 394 aaKnown RBP16.74■□□□□ 0.27
PCDHB3-201ENST00000231130 KRT85P78386 507 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 TTC14Q96N46 770 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 ACEP12821 1306 aa16.73■□□□□ 0.27
PCDHB3-201ENST00000231130 FILIP1Q7Z7B0 1213 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 C10orf67Q8IYJ2 551 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 PI4K2BQ8TCG2 481 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 SPATA32Q96LK8 384 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 CBX8Q9HC52 389 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 CPS1P31327 1500 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 TPM3P06753 285 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 FUCA2Q9BTY2 467 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
PCDHB3-201ENST00000231130 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 ZKSCAN1P17029 563 aaPredicted RBP16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 MORC2Q9Y6X9 1032 aaPredicted RBP16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 ELF2Q15723 593 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
PCDHB3-201ENST00000231130 ERCC4Q92889 916 aaPredicted RBP16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 KIF1BPQ96EK5 621 aa16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 EYA1Q99502 592 aa16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 CLIP2Q9UDT6 1046 aa16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 ZNF215Q9UL58 517 aaPredicted RBP16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.26
PCDHB3-201ENST00000231130 ZNF165P49910 485 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 FAM227BQ96M60 508 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 ZNF397Q8NF99 534 aaPredicted RBP16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 SIL1Q9H173 461 aa16.7■□□□□ 0.26
PCDHB3-201ENST00000231130 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
PCDHB3-201ENST00000231130 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
PCDHB3-201ENST00000231130 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
PCDHB3-201ENST00000231130 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
PCDHB3-201ENST00000231130 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms