RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Hdhd2Q3UGR5 259 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Tex19.1Q99MV2 351 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Smco2Q9DA21 347 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Epb41l3Q9WV92 929 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Tbc1d9Q3UYK3 1264 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 RarsQ9D0I9 660 aaKnown RBP13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Dapk3O54784 448 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Stx8O88983 236 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Chpf2Q3UU43 768 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Smc5Q8CG46 1101 aaKnown RBP13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Vps16Q920Q4 839 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Paip2Q9D6V8 124 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Neurog2P70447 263 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Ssrp1Q08943 708 aaKnown RBP13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Q4VA45 678 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 ClasrpQ8CFC7 668 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Tmco5aQ9D9D5 303 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Znf394Q9Z1D9 521 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Q3UPC7 1272 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Fam177a1Q8BR63 207 aa13.54□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Rapgef3Q8VCC8 918 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 ParvgQ9ERD8 331 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Hmgb2P30681 210 aaKnown RBP13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Kmt5bQ3U8K7 883 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Ccdc12Q8R344 166 aaKnown RBP13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Slc12a5Q91V14 1138 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Krt23Q99PS0 422 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Cwc25Q9DBF7 416 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 TimelessQ9R1X4 1197 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Ttc21bQ0HA38 1315 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 NrkQ9R0G8 1455 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Zmym3Q9JLM4 1370 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Cep135Q6P5D4 1140 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Bms1Q6PGF5 1284 aaKnown RBP13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Atf7Q8R0S1 413 aa13.53□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Izumo3A6PWV3 263 aa13.52□□□□□ -0.24
Scn8a-208ENSMUST00000200963 Mybbp1aQ7TPV4 1344 aaKnown RBP13.52□□□□□ -0.24
Scn8a-208ENSMUST00000200963 A2mQ6GQT1 1474 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Zkscan7E9PVW1 718 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 IqcgQ80W32 419 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Speer4dL7N216 212 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Pde4dQ01063 747 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Mcm10Q0VBD2 885 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Slc5a4bQ91ZP4 660 aa13.52□□□□□ -0.25
Scn8a-208ENSMUST00000200963 EprsQ8CGC7 1512 aaKnown RBP13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Usp5P56399 858 aaKnown RBP13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ncf1Q09014 390 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Fam170aQ66LM6 333 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Fam163aQ8CAA5 168 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Sall3Q62255 1320 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Sept7O55131 436 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ankrd40Q5SUE8 363 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Pkd2l2Q9JLG4 621 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ktn1Q61595 1327 aaKnown RBP13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Tiam1Q60610 1591 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Gng11P61953 73 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Fam107bQ3TGF2 131 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Mtmr3Q8K296 1196 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Tmx1Q8VBT0 278 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Vps36Q91XD6 386 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Mmel1Q9JLI3 765 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Stat1P42225 749 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Mctp2Q5RJH2 878 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 RragbQ6NTA4 374 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 CadpsQ80TJ1 1355 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Tmod2Q9JKK7 351 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 E9QMW4 1145 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Smarcad1Q04692 1021 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Vps37cQ8R105 352 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Vps18Q8R307 973 aa13.51□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ube2hP62257 183 aa13.5□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Noc2lQ9WV70 747 aaKnown RBP13.5□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Uchl5Q9WUP7 329 aa13.5□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Exoc5Q3TPX4 708 aa13.5□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Hmg20bQ9Z104 317 aa13.5□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Anapc15-psA0A140T8L6 141 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Terf2O35144 541 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ca8P28651 291 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Tmem266Q8BZB3 538 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Slc1a4O35874 532 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Krt15Q61414 452 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 4931400O07RikQ9D4M5 137 aa13.49□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Dnm1P39053 867 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 DlatQ8BMF4 642 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Plekho1Q9JIY0 408 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 U2af1l4Q8BGJ9 220 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Shtn1Q8K2Q9 631 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 WtapQ9ER69 396 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Grin2bQ01097 1482 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ankle2Q6P1H6 964 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Kdm3aQ6PCM1 1323 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 SfpqQ8VIJ6 699 aaKnown RBP13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Haus2Q9CQS9 234 aa13.48□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Usp25P57080 1055 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Smarcc1P97496 1104 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Specc1Q5SXY1 1067 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Cyp4f39Q8BGU0 532 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Ctage5Q8R311 779 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Rab3il1Q8VDV3 383 aa13.47□□□□□ -0.25
Scn8a-208ENSMUST00000200963 Krt79Q8VED5 531 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 108.5 ms